This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3b57
From Proteopedia
(Difference between revisions)
| (10 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3b57.gif|left|200px]] | ||
| - | + | ==Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua. Northeast Structural Consortium target LkR65== | |
| - | + | <StructureSection load='3b57' size='340' side='right'caption='[[3b57]], [[Resolution|resolution]] 3.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[3b57]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lisin Lisin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B57 FirstGlance]. <br> |
| - | | | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | | | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qgs|2qgs]]</div></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin1889 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272626 LISIN])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b57 OCA], [https://pdbe.org/3b57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b57 RCSB], [https://www.ebi.ac.uk/pdbsum/3b57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b57 ProSAT], [https://www.topsan.org/Proteins/NESGC/3b57 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b5/3b57_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Abashidze, M | + | </jmolCheckbox> |
| - | [[Category: Acton, T B | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b57 ConSurf]. |
| - | [[Category: Baran, M C | + | <div style="clear:both"></div> |
| - | [[Category: Benach, J | + | __TOC__ |
| - | [[Category: Cunningham, K | + | </StructureSection> |
| - | [[Category: Forouhar, F | + | [[Category: Large Structures]] |
| - | [[Category: Hunt, J F | + | [[Category: Lisin]] |
| - | [[Category: Janjua, H | + | [[Category: Abashidze, M]] |
| - | [[Category: Kuzin, A P | + | [[Category: Acton, T B]] |
| - | [[Category: Liu, J | + | [[Category: Baran, M C]] |
| - | [[Category: Ma, L | + | [[Category: Benach, J]] |
| - | [[Category: Montelione, G T | + | [[Category: Cunningham, K]] |
| - | [[Category: | + | [[Category: Forouhar, F]] |
| - | [[Category: Rost, B | + | [[Category: Hunt, J F]] |
| - | [[Category: Seetharaman, J | + | [[Category: Janjua, H]] |
| - | [[Category: Tong, L | + | [[Category: Kuzin, A P]] |
| - | [[Category: Vorobiev, S M | + | [[Category: Liu, J]] |
| - | [[Category: Wang, H | + | [[Category: Ma, L C]] |
| - | [[Category: Xiao, R | + | [[Category: Montelione, G T]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: | + | [[Category: Rost, B]] |
| - | [[Category: | + | [[Category: Seetharaman, J]] |
| - | + | [[Category: Tong, L]] | |
| - | [[Category: | + | [[Category: Vorobiev, S M]] |
| - | [[Category: | + | [[Category: Wang, H]] |
| - | + | [[Category: Xiao, R]] | |
| - | + | [[Category: Lin1889]] | |
| - | + | [[Category: Nesg]] | |
| - | + | [[Category: PSI, Protein structure initiative]] | |
| - | + | [[Category: Q92an1]] | |
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua. Northeast Structural Consortium target LkR65
| |||||||||||
Categories: Large Structures | Lisin | Abashidze, M | Acton, T B | Baran, M C | Benach, J | Cunningham, K | Forouhar, F | Hunt, J F | Janjua, H | Kuzin, A P | Liu, J | Ma, L C | Montelione, G T | Structural genomic | Rost, B | Seetharaman, J | Tong, L | Vorobiev, S M | Wang, H | Xiao, R | Lin1889 | Nesg | PSI, Protein structure initiative | Q92an1 | Unknown function
