2vp1

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(New page: 200px {{Structure |PDB= 2vp1 |SIZE=350|CAPTION= <scene name='initialview01'>2vp1</scene>, resolution 2.70&Aring; |SITE= <scene name='pdbsite=AC1:Binding+Site+For+...)
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[[Image:2vp1.jpg|left|200px]]
 
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{{Structure
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==Fe-FutA2 from Synechocystis PCC6803==
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|PDB= 2vp1 |SIZE=350|CAPTION= <scene name='initialview01'>2vp1</scene>, resolution 2.70&Aring;
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<StructureSection load='2vp1' size='340' side='right'caption='[[2vp1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Fe+A+1347'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Fe+B+1347'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Cl+A+1348'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Cl+B+1348'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Mes+A+1349'>AC5</scene> and <scene name='pdbsite=AC6:Binding+Site+For+Residue+Mes+B+1349'>AC6</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>
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<table><tr><td colspan='2'>[[2vp1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VP1 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1840 AfuA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01547 SBP_bac_1]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vp1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vp1 OCA], [https://pdbe.org/2vp1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vp1 RCSB], [https://www.ebi.ac.uk/pdbsum/2vp1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vp1 ProSAT]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vp1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vp1 OCA], [http://www.ebi.ac.uk/pdbsum/2vp1 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2vp1 RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/FUTA2_SYNY3 FUTA2_SYNY3] Probably part of a periplasmic ABC transporter complex futA1A2BC (TC 3.A.1.10.2) involved in Fe(3+) ion import (ferric iron). This protein and futA1 (slr1295) are subunit proteins that have redundant or overlapping substrate-binding functions (Probable). The differing subcellular locations of futA1 (predominantly thylakoid lumen) and futA2 (predominantly periplasmic) suggest they may fulfill different roles.<ref>PMID:11292796</ref> <ref>PMID:17148438</ref> Plays an important role in protecting the acceptor side of photosystem II (PSII) against oxidative damage, especially under iron-limiting growth conditions (Potential).<ref>PMID:11292796</ref> <ref>PMID:17148438</ref> Plays an undefined role in copper supply to thylakoid proteins.<ref>PMID:11292796</ref> <ref>PMID:17148438</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vp/2vp1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vp1 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Synechocystis PCC 6803 has a high demand for iron (10 times greater than Escherichia coli) to sustain photosynthesis and is unusual in possessing at least two putative iron-binding proteins of a type normally associated with ATP-binding cassette-type importers. It has been suggested that one of these, FutA2, binds ferrous iron, but herein we clearly demonstrate that this protein avidly binds Fe(III), the oxidation state preference of periplasmic iron-binding proteins. Structures of apo-FutA2 and Fe-FutA2 have been determined at 1.7 and 2.7A, respectively. The metal ion is bound in a distorted trigonal bipyramidal arrangement with no exogenous anions as ligands. The metal-binding environment, including the second coordination sphere and charge properties, is consistent with a preference for Fe(III). Atypically, FutA2 has a Tat signal peptide, and its inability to coordinate divalent cations may be crucial to prevent metals from binding to the folded protein prior to export from the cytosol. A loop containing the His(43) ligand undergoes considerable movement in apo-versus Fe-FutA2 and may control metal release to the importer. Although these data are consistent with FutA2 being the periplasmic component involved in iron uptake, deletion of another putative ferric binding protein, FutA1, has a greater effect on the accumulation of iron and is more analogous to a DeltafutA1DeltafutA2 double mutant than DeltafutA2. Here, we also discover that there is a reduced level of ferric FutA2 in the periplasm of the DeltafutA1 mutant providing an explanation for its severe iron-uptake phenotype.
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'''FE-FUTA2 FROM SYNECHOCYSTIS PCC6803'''
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FutA2 is a ferric binding protein from Synechocystis PCC 6803.,Badarau A, Firbank SJ, Waldron KJ, Yanagisawa S, Robinson NJ, Banfield MJ, Dennison C J Biol Chem. 2008 May 2;283(18):12520-7. Epub 2008 Feb 4. PMID:18252722<ref>PMID:18252722</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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==About this Structure==
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</div>
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2VP1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VP1 OCA].
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<div class="pdbe-citations 2vp1" style="background-color:#fffaf0;"></div>
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[[Category: Single protein]]
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== References ==
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[[Category: Synechocystis sp.]]
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<references/>
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[[Category: Badarau, A.]]
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__TOC__
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[[Category: Banfield, M J.]]
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</StructureSection>
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[[Category: Dennison, C.]]
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[[Category: Large Structures]]
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[[Category: Firbank, S J.]]
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[[Category: Synechocystis sp. PCC 6803]]
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[[Category: ferric binding protein]]
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[[Category: Badarau A]]
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[[Category: futa2]]
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[[Category: Banfield MJ]]
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[[Category: iron]]
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[[Category: Dennison C]]
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[[Category: metal-binding protein]]
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[[Category: Firbank SJ]]
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[[Category: synechocysti]]
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[[Category: tat]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 09:55:01 2008''
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Current revision

Fe-FutA2 from Synechocystis PCC6803

PDB ID 2vp1

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