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3cjn

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Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi

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Retrieved from "http://52.214.119.220/wiki/index.php/3cjn"

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-[[Image:3cjn.jpg|left|200px]]
- {{Structure
+==Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi==
-|PDB= 3cjn |SIZE=350|CAPTION= <scene name='initialview01'>3cjn</scene>, resolution 1.95&Aring;
+<StructureSection load='3cjn' size='340' side='right'caption='[[3cjn]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Residue+A+201'>AC1</scene>
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
+<table><tr><td colspan='2'>[[3cjn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruepo Ruepo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJN FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-|GENE= SPO1458 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1846 MarR], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00347 HTH_MARR]</span>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO1458 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246200 RUEPO])</td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjn OCA], [http://www.ebi.ac.uk/pdbsum/3cjn PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=3cjn RCSB]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjn OCA], [https://pdbe.org/3cjn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjn RCSB], [https://www.ebi.ac.uk/pdbsum/3cjn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjn ProSAT], [https://www.topsan.org/Proteins/MCSG/3cjn TOPSAN]</span></td></tr>
-}}
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjn_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjn ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi'''
+==See Also==
+*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-CJN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJN OCA].
+[[Category: Large Structures]]
-[[Category: Bacteria]]
+[[Category: Ruepo]]
-[[Category: Single protein]]
+[[Category: Chang, C]]
-[[Category: Chang, C.]]
+[[Category: Freeman, L]]
-[[Category: Freeman, L.]]
+[[Category: Joachimiak, A]]
-[[Category: Joachimiak, A.]]
+[[Category: Structural genomic]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Volkart, L]]
-[[Category: Volkart, L.]]
+[[Category: Dna-binding]]
-[[Category: dna-binding]]
+[[Category: Marr family]]
-[[Category: marr family]]
+[[Category: Mcsg]]
-[[Category: mcsg]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: midwest center for structural genomic]]
+[[Category: Silicibacter pomeroyi]]
-[[Category: protein structure initiative]]
+[[Category: Transcription regulation]]
-[[Category: psi-2]]
+[[Category: Transcription regulator]]
-[[Category: silicibacter pomeroyi]]
+[[Category: Transcriptional regulator]]
-[[Category: structural genomic]]
-[[Category: transcription regulation]]
-[[Category: transcription regulator]]
-[[Category: transcriptional regulator]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 10:00:24 2008''

3cjn

From Proteopedia

Current revision

Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi

Structural highlights

Evolutionary Conservation

See Also

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