This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5c2v
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Kuenenia stuttgartiensis Hydrazine Synthase== | ==Kuenenia stuttgartiensis Hydrazine Synthase== | ||
| - | <StructureSection load='5c2v' size='340' side='right' caption='[[5c2v]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='5c2v' size='340' side='right'caption='[[5c2v]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5c2v]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5c2v]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Kuenenia_stuttgartiensis Candidatus Kuenenia stuttgartiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C2V FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BET:TRIMETHYL+GLYCINE'>BET</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BET:TRIMETHYL+GLYCINE'>BET</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c2v OCA], [https://pdbe.org/5c2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c2v RCSB], [https://www.ebi.ac.uk/pdbsum/5c2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c2v ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HZSA_KUEST HZSA_KUEST] Component of the hydrazine synthase complex that catalyzes the condensation of nitric oxide (NO) with ammonium to form hydrazine (PubMed:21964329). The alpha subunit catalyzes the second half-reaction, i.e. the condensation of hydroxylamine formed in the active site of the gamma subunit with ammonia, yielding hydrazine (PubMed:26479033). Is involved in anaerobic ammonium oxidation (anammox), a biological process in which nitrite is used as the electron acceptor in the conversion of ammonium to dinitrogen gas (N2) and water; this bacterial process has a major role in the Earth's nitrogen cycle and has been estimated to synthesize up to 50% of the dinitrogen gas emitted into our atmosphere from the oceans (PubMed:21964329, PubMed:26479033).<ref>PMID:21964329</ref> <ref>PMID:26479033</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 19: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Candidatus | + | [[Category: Candidatus Kuenenia stuttgartiensis]] |
| - | [[Category: Barends | + | [[Category: Large Structures]] |
| - | [[Category: Dietl | + | [[Category: Barends TRM]] |
| - | [[Category: Ferousi | + | [[Category: Dietl A]] |
| - | [[Category: Jetten | + | [[Category: Ferousi C]] |
| - | [[Category: Kartal | + | [[Category: Jetten MSM]] |
| - | [[Category: Keltjens | + | [[Category: Kartal B]] |
| - | [[Category: Maalcke | + | [[Category: Keltjens JT]] |
| - | [[Category: Menzel | + | [[Category: Maalcke WJ]] |
| - | [[Category: Vries | + | [[Category: Menzel A]] |
| - | + | [[Category: De Vries S]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Kuenenia stuttgartiensis Hydrazine Synthase
| |||||||||||
