This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5cdf
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Structure at 2.3 A of the alpha/beta monomer of the F-ATPase from Paracoccus denitrificans== | ==Structure at 2.3 A of the alpha/beta monomer of the F-ATPase from Paracoccus denitrificans== | ||
| - | <StructureSection load='5cdf' size='340' side='right' caption='[[5cdf]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='5cdf' size='340' side='right'caption='[[5cdf]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5cdf]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5cdf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CDF FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cdf OCA], [https://pdbe.org/5cdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cdf RCSB], [https://www.ebi.ac.uk/pdbsum/5cdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cdf ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ATPA_PARDP ATPA_PARDP] Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 18: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 5cdf" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5cdf" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[ATPase 3D structures|ATPase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Paracoccus denitrificans]] | [[Category: Paracoccus denitrificans]] | ||
| - | [[Category: Garcia-Trejo | + | [[Category: Garcia-Trejo JJ]] |
| - | [[Category: Leslie | + | [[Category: Leslie AGW]] |
| - | [[Category: Montgomery | + | [[Category: Montgomery MG]] |
| - | [[Category: Morales-Rios | + | [[Category: Morales-Rios E]] |
| - | [[Category: Walker | + | [[Category: Walker JE]] |
| - | + | ||
Current revision
Structure at 2.3 A of the alpha/beta monomer of the F-ATPase from Paracoccus denitrificans
| |||||||||||
