2rvh

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m (Protected "2rvh" [edit=sysop:move=sysop])
Current revision (20:53, 12 April 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 2rvh is ON HOLD until Paper Publication
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==NMR structure of eIF1==
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<StructureSection load='2rvh' size='340' side='right'caption='[[2rvh]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2rvh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RVH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RVH FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rvh OCA], [https://pdbe.org/2rvh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rvh RCSB], [https://www.ebi.ac.uk/pdbsum/2rvh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rvh ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SUI1_YEAST SUI1_YEAST] Additional factor that functions in concert with eIF-2 and the initiator tRNA in directing the ribosome to the proper start site of translation.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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During eukaryotic translation initiation, eIF3 binds the solvent-accessible side of the 40S ribosome and recruits the gate-keeper protein eIF1 and eIF5 to the decoding center. This is largely mediated by the N-terminal domain (NTD) of eIF3c, which can be divided into three parts: 3c0, 3c1, and 3c2. The N-terminal part, 3c0, binds eIF5 strongly but only weakly to the ribosome-binding surface of eIF1, whereas 3c1 and 3c2 form a stoichiometric complex with eIF1. 3c1 contacts eIF1 through Arg-53 and Leu-96, while 3c2 faces 40S protein uS15/S13, to anchor eIF1 to the scanning pre-initiation complex (PIC). We propose that the 3c0:eIF1 interaction diminishes eIF1 binding to the 40S, whereas 3c0:eIF5 interaction stabilizes the scanning PIC by precluding this inhibitory interaction. Upon start codon recognition, interactions involving eIF5, and ultimately 3c0:eIF1 association, facilitate eIF1 release. Our results reveal intricate molecular interactions within the PIC, programmed for rapid scanning-arrest at the start codon.
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Authors: Nagata, T., Obayashi, E., Asano, K.
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Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.,Obayashi E, Luna RE, Nagata T, Martin-Marcos P, Hiraishi H, Singh CR, Erzberger JP, Zhang F, Arthanari H, Morris J, Pellarin R, Moore C, Harmon I, Papadopoulos E, Yoshida H, Nasr ML, Unzai S, Thompson B, Aube E, Hustak S, Stengel F, Dagraca E, Ananbandam A, Gao P, Urano T, Hinnebusch AG, Wagner G, Asano K Cell Rep. 2017 Mar 14;18(11):2651-2663. doi: 10.1016/j.celrep.2017.02.052. PMID:28297669<ref>PMID:28297669</ref>
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Description: NMR structure of eIF1
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Asano, K]]
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<div class="pdbe-citations 2rvh" style="background-color:#fffaf0;"></div>
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[[Category: Nagata, T]]
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== References ==
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[[Category: Obayashi, E]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Asano K]]
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[[Category: Nagata T]]
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[[Category: Obayashi E]]

Current revision

NMR structure of eIF1

PDB ID 2rvh

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