4x9z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:30, 6 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4x9z is ON HOLD until Paper Publication
+
==Dimeric conotoxin alphaD-GeXXA==
 +
<StructureSection load='4x9z' size='340' side='right'caption='[[4x9z]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4x9z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Conus_generalis Conus generalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X9Z FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x9z OCA], [https://pdbe.org/4x9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x9z RCSB], [https://www.ebi.ac.uk/pdbsum/4x9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x9z ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDKA_CONGR CDKA_CONGR] Alpha-D-conopeptides act as non-competitive inhibitors of nicotinic acetylcholine receptors (nAChR). Through its two C-terminal domains, this homodimeric protein would bind to two nAChR allosteric sites, located outside the nAChR C-loop of the principal binding face and at the adjacent binding interface in a clockwise direction (By similarity). This toxin has strong inhibitory activity on rat alpha-9-alpha-10 (CHRNA9-CHRNA10) (IC(50)=1.2 nM) and a moderate inhibitory activity on human alpha-7 (CHRNA7) (IC(50)=210 nM), rat alpha-3-beta-2 (CHRNA3-CHRNB2) (IC(50)=498 nM), rat alpha-3-beta-4 (CHRNA3-CHRNB4) (IC(50)=614 nM) and rat alpha-1-beta-1-delta-epsilon (CHRNA1-CHRNB1-CHRNE-CHRND) (IC(50)=743 nM) subtypes (PubMed:26395518). Shows a weaker inhibitory activity on human alpha-9-alpha-10 (IC(50)=28 nM) than on the rat channel (PubMed:26395518). This is explained by a different residue in the probable binding site (His-31 in rat alpha-10 and Leu-31 in human) (PubMed:26395518).[UniProtKB:P0C1W6]<ref>PMID:26395518</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Nicotinic acetylcholine receptors (nAChRs) play essential roles in transmitting acetylcholine-mediated neural signals across synapses and neuromuscular junctions, and are also closely linked to various diseases and clinical conditions. Therefore, novel nAChR-specific compounds have great potential for both neuroscience research and clinical applications. Conotoxins, the peptide neurotoxins produced by cone snails, are a rich reservoir of novel ligands that target receptors, ion channels and transporters in the nervous system. From the venom of Conus generalis, we identified a novel dimeric nAChR-inhibiting alphaD-conotoxin GeXXA. By solving the crystal structure and performing structure-guided dissection of this toxin, we demonstrated that the monomeric C-terminal domain of alphaD-GeXXA, GeXXA-CTD, retains inhibitory activity against the alpha9alpha10 nAChR subtype. Furthermore, we identified that His7 of the rat alpha10 nAChR subunit determines the species preference of alphaD-GeXXA, and is probably part of the binding site of this toxin. These results together suggest that alphaD-GeXXA cooperatively binds to two inter-subunit interfaces on the top surface of nAChR, thus allosterically disturbing the opening of the receptor. The novel antagonistic mechanism of alphaD-GeXXA via a new binding site on nAChRs provides a valuable basis for the rational design of new nAChR-targeting compounds.
-
Authors: Xu, S., Zhang, T., Kompella, S., Adams, D., Ding, J., Wang, C.
+
Conotoxin alphaD-GeXXA utilizes a novel strategy to antagonize nicotinic acetylcholine receptors.,Xu S, Zhang T, Kompella SN, Yan M, Lu A, Wang Y, Shao X, Chi C, Adams DJ, Ding J, Wang C Sci Rep. 2015 Sep 23;5:14261. doi: 10.1038/srep14261. PMID:26395518<ref>PMID:26395518</ref>
-
Description: Dimeric conotoxin alphaD-GeXXA
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Ding, J]]
+
<div class="pdbe-citations 4x9z" style="background-color:#fffaf0;"></div>
-
[[Category: Zhang, T]]
+
== References ==
-
[[Category: Xu, S]]
+
<references/>
-
[[Category: Wang, C]]
+
__TOC__
-
[[Category: Adams, D]]
+
</StructureSection>
-
[[Category: Kompella, S]]
+
[[Category: Conus generalis]]
 +
[[Category: Large Structures]]
 +
[[Category: Adams D]]
 +
[[Category: Ding J]]
 +
[[Category: Kompella S]]
 +
[[Category: Wang C]]
 +
[[Category: Xu S]]
 +
[[Category: Zhang T]]

Current revision

Dimeric conotoxin alphaD-GeXXA

PDB ID 4x9z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools