4wxl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 20 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin==
==Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin==
-
<StructureSection load='4wxl' size='340' side='right' caption='[[4wxl]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
+
<StructureSection load='4wxl' size='340' side='right'caption='[[4wxl]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4wxl]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WXL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WXL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4wxl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_86-028NP Haemophilus influenzae 86-028NP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WXL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WXL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BB2:ACTINONIN'>BB2</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4wxk|4wxk]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BB2:ACTINONIN'>BB2</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wxl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wxl OCA], [https://pdbe.org/4wxl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wxl RCSB], [https://www.ebi.ac.uk/pdbsum/4wxl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wxl ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wxl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wxl OCA], [http://pdbe.org/4wxl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wxl RCSB], [http://www.ebi.ac.uk/pdbsum/4wxl PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DEF_HAEI8 DEF_HAEI8]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
+
[https://www.uniprot.org/uniprot/DEF_HAEI8 DEF_HAEI8] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Peptide deformylase]]
+
[[Category: Haemophilus influenzae 86-028NP]]
-
[[Category: Addlagatta, A]]
+
[[Category: Large Structures]]
-
[[Category: Kishor, C]]
+
[[Category: Addlagatta A]]
-
[[Category: Hydrolase]]
+
[[Category: Kishor C]]

Current revision

Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin

PDB ID 4wxl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools