5evy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:11, 20 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Salicylate hydroxylase substrate complex==
==Salicylate hydroxylase substrate complex==
-
<StructureSection load='5evy' size='340' side='right' caption='[[5evy]], [[Resolution|resolution]] 2.47&Aring;' scene=''>
+
<StructureSection load='5evy' size='340' side='right'caption='[[5evy]], [[Resolution|resolution]] 2.47&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5evy]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EVY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EVY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5evy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EVY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.47&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Salicylate_1-monooxygenase Salicylate 1-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.13.1 1.14.13.1] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5evy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5evy OCA], [http://pdbe.org/5evy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5evy RCSB], [http://www.ebi.ac.uk/pdbsum/5evy PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5evy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5evy OCA], [https://pdbe.org/5evy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5evy RCSB], [https://www.ebi.ac.uk/pdbsum/5evy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5evy ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/Q59713_PSEPU Q59713_PSEPU]
-
The X-ray crystal structure of a salicylate hydroxylase from Pseudomonas putida S-1 complexed with coenzyme FAD has been determined to a resolution of 2.5 A. Structural conservation with p- or m-hydroxybenzoate hydroxylase is very good throughout the topology, despite a low amino sequence identity of 20-40% between these three hydroxylases. Salicylate hydroxylase is composed of three distinct domains and includes FAD between domains I and II, which is accessible to solvent. In this study, which analyzes the tertiary structure of the enzyme, the unique reaction of salicylate, i.e. decarboxylative hydroxylation, and the structural roles of amino acids surrounding the substrate, are considered.
+
-
 
+
-
The catalytic mechanism of decarboxylative hydroxylation of salicylate hydroxylase revealed by crystal structure analysis at 2.5 A resolution.,Uemura T, Kita A, Watanabe Y, Adachi M, Kuroki R, Morimoto Y Biochem Biophys Res Commun. 2015 Nov 23. pii: S0006-291X(15)30956-6. doi:, 10.1016/j.bbrc.2015.11.087. PMID:26616054<ref>PMID:26616054</ref>
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
==See Also==
-
</div>
+
*[[Hydroxylases 3D structures|Hydroxylases 3D structures]]
-
<div class="pdbe-citations 5evy" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Salicylate 1-monooxygenase]]
+
[[Category: Large Structures]]
-
[[Category: Morimoto, Y]]
+
[[Category: Pseudomonas putida]]
-
[[Category: Uemura, T]]
+
[[Category: Morimoto Y]]
-
[[Category: Complex]]
+
[[Category: Uemura T]]
-
[[Category: Monooxygenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Salicylate hydroxylase substrate complex

PDB ID 5evy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools