This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5byo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:18, 6 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Computationally designed left-handed alpha/alpha toroid with 12 repeats==
==Computationally designed left-handed alpha/alpha toroid with 12 repeats==
-
<StructureSection load='5byo' size='340' side='right' caption='[[5byo]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='5byo' size='340' side='right'caption='[[5byo]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5byo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BYO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BYO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5byo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BYO FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5byo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5byo OCA], [http://pdbe.org/5byo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5byo RCSB], [http://www.ebi.ac.uk/pdbsum/5byo PDBsum]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.503&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5byo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5byo OCA], [https://pdbe.org/5byo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5byo RCSB], [https://www.ebi.ac.uk/pdbsum/5byo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5byo ProSAT]</span></td></tr>
</table>
</table>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bradley, P]]
+
[[Category: Large Structures]]
-
[[Category: Doyle, L]]
+
[[Category: Synthetic construct]]
-
[[Category: Stoddard, B L]]
+
[[Category: Bradley P]]
-
[[Category: Alpha helix]]
+
[[Category: Doyle L]]
-
[[Category: Computationally designed]]
+
[[Category: Stoddard BL]]
-
[[Category: De novo protein]]
+
-
[[Category: Left-handed]]
+
-
[[Category: Rosetta]]
+
-
[[Category: Toroid]]
+

Current revision

Computationally designed left-handed alpha/alpha toroid with 12 repeats

PDB ID 5byo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools