5ha1

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'''Unreleased structure'''
 
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The entry 5ha1 is ON HOLD
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==Crystal structure of human cellular retinol binding protein 1 in complex with retinylamine==
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<StructureSection load='5ha1' size='340' side='right'caption='[[5ha1]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5ha1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HA1 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RNE:(2~{E},4~{E},6~{E},8~{E})-3,7-DIMETHYL-9-(2,6,6-TRIMETHYLCYCLOHEXEN-1-YL)NONA-2,4,6,8-TETRAEN-1-AMINE'>RNE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ha1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ha1 OCA], [https://pdbe.org/5ha1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ha1 RCSB], [https://www.ebi.ac.uk/pdbsum/5ha1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ha1 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RET1_HUMAN RET1_HUMAN] Intracellular transport of retinol.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Important in regulating the uptake, storage, and metabolism of retinoids, cellular retinol-binding protein 1 (CRBP1) is essential for trafficking vitamin A through the cytoplasm. However, the molecular details of ligand uptake and targeted release by CRBP1 remain unclear. Here we report the first structure of CRBP1 in a ligand-free form as well as ultra-high resolution structures of this protein bound to either all-trans-retinol or retinylamine, the latter a therapeutic retinoid that prevents light-induced retinal degeneration. Superpositioning of human apo- and holo-CRBP1 revealed major differences within segments surrounding the entrance to the retinoid-binding site. These included alpha-helix II and hairpin turns between beta-strands betaC-betaD and betaE-betaF as well as several side chains, such as Phe-57, Tyr-60, and Ile-77, that change their orientations to accommodate the ligand. Additionally, we mapped hydrogen bond networks inside the retinoid-binding cavity and demonstrated their significance for the ligand affinity. Analyses of the crystallographic B-factors indicated several regions with higher backbone mobility in the apoprotein that became more rigid upon retinoid binding. This conformational flexibility of human apo-CRBP1 facilitates interaction with the ligands, whereas the more rigid holoprotein structure protects the labile retinoid moiety during vitamin A transport. These findings suggest a mechanism of induced fit upon ligand binding by mammalian cellular retinol-binding proteins.
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Authors: Golczak, M., Arne, J.M., Silvaroli, J.A., Kiser, P.D., Banerjee, S.
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Ligand Binding Induces Conformational Changes in Human Cellular Retinol-binding Protein 1 (CRBP1) Revealed by Atomic Resolution Crystal Structures.,Silvaroli JA, Arne JM, Chelstowska S, Kiser PD, Banerjee S, Golczak M J Biol Chem. 2016 Apr 15;291(16):8528-40. doi: 10.1074/jbc.M116.714535. Epub 2016, Feb 21. PMID:26900151<ref>PMID:26900151</ref>
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Description: Crystal structure of human cellular retinol binding protein 1 in complex with retinylamine
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Arne, J.M]]
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<div class="pdbe-citations 5ha1" style="background-color:#fffaf0;"></div>
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[[Category: Banerjee, S]]
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[[Category: Silvaroli, J.A]]
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==See Also==
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[[Category: Kiser, P.D]]
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*[[Retinol-binding protein 3D structures|Retinol-binding protein 3D structures]]
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[[Category: Golczak, M]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Arne JM]]
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[[Category: Banerjee S]]
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[[Category: Golczak M]]
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[[Category: Kiser PD]]
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[[Category: Silvaroli JA]]

Current revision

Crystal structure of human cellular retinol binding protein 1 in complex with retinylamine

PDB ID 5ha1

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