This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ha4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 5ha4 is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: Structure of a diaminopimelate epimerase f...)
Current revision (07:28, 9 August 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5ha4 is ON HOLD
+
==Structure of a diaminopimelate epimerase from Acinetobacter baumannii==
-
 
+
<StructureSection load='5ha4' size='340' side='right'caption='[[5ha4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5ha4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_AB307-0294 Acinetobacter baumannii AB307-0294]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HA4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HA4 FirstGlance]. <br>
-
Description: Structure of a diaminopimelate epimerase from Acinetobacter baumannii
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-
[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ha4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ha4 OCA], [https://pdbe.org/5ha4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ha4 RCSB], [https://www.ebi.ac.uk/pdbsum/5ha4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ha4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DAPF_ACIB3 DAPF_ACIB3] Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Acinetobacter baumannii AB307-0294]]
 +
[[Category: Large Structures]]

Current revision

Structure of a diaminopimelate epimerase from Acinetobacter baumannii

PDB ID 5ha4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools