5hcj
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5hcj is ON HOLD Authors: Shahsavar, A., Sauguet, L., Delarue, M. Description: Cationic Ligand-Gated Ion Channel Category: Unreleased Structures...) |
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- | '''Unreleased structure''' | ||
- | + | ==Cationic Ligand-Gated Ion Channel== | |
+ | <StructureSection load='5hcj' size='340' side='right'caption='[[5hcj]], [[Resolution|resolution]] 2.95Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5hcj]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HCJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HCJ FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=MBR:TRIBROMOMETHANE'>MBR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hcj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hcj OCA], [https://pdbe.org/5hcj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hcj RCSB], [https://www.ebi.ac.uk/pdbsum/5hcj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hcj ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/GLIC_GLOVI GLIC_GLOVI] Cationic channel with similar permeabilities for Na(+) and K(+), that is activated by an increase of the proton concentration on the extracellular side. Displays no permeability for chloride ions. Shows slow kinetics of activation, no desensitization and a single channel conductance of 8 pS. Might contribute to adaptation to external pH change.<ref>PMID:17167423</ref> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Pentameric ligand-gated ion channels have been identified as the principal target of general anesthetics (GA), whose molecular mechanism of action remains poorly understood. Bacterial homologs, such as the Gloeobacter violaceus receptor (GLIC), have been shown to be valid functional models of GA action. The GA bromoform inhibits GLIC at submillimolar concentration. We characterize bromoform binding by crystallography and molecular dynamics (MD) simulations. GLIC's open form structure identified three intra-subunit binding sites. We crystallized the locally closed form with an additional bromoform molecule in the channel pore. We systematically compare binding with the multiple potential sites of allosteric channel regulation in the open, locally closed, and resting forms. MD simulations reveal differential exchange pathways between sites from one form to the other. GAs predominantly access the receptor from the lipid bilayer in all cases. Differential binding affinity among the channel forms is observed; the pore site markedly stabilizes the inactive versus active state. | ||
- | + | Sites of Anesthetic Inhibitory Action on a Cationic Ligand-Gated Ion Channel.,Laurent B, Murail S, Shahsavar A, Sauguet L, Delarue M, Baaden M Structure. 2016 Apr 5;24(4):595-605. doi: 10.1016/j.str.2016.02.014. Epub 2016, Mar 24. PMID:27021161<ref>PMID:27021161</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5hcj" style="background-color:#fffaf0;"></div> |
- | [[Category: Sauguet | + | |
- | [[Category: | + | ==See Also== |
+ | *[[Ion channels 3D structures|Ion channels 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Gloeobacter violaceus]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Delarue M]] | ||
+ | [[Category: Sauguet L]] | ||
+ | [[Category: Shahsavar A]] |
Current revision
Cationic Ligand-Gated Ion Channel
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