1bj7

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[[Image:1bj7.gif|left|200px]]
 
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{{Structure
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==BOVINE LIPOCALIN ALLERGEN BOS D 2==
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|PDB= 1bj7 |SIZE=350|CAPTION= <scene name='initialview01'>1bj7</scene>, resolution 1.8&Aring;
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<StructureSection load='1bj7' size='340' side='right'caption='[[1bj7]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[1bj7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BJ7 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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|GENE=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bj7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bj7 OCA], [https://pdbe.org/1bj7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bj7 RCSB], [https://www.ebi.ac.uk/pdbsum/1bj7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bj7 ProSAT]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bj7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bj7 OCA], [http://www.ebi.ac.uk/pdbsum/1bj7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bj7 RCSB]</span>
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[https://www.uniprot.org/uniprot/ALL2_BOVIN ALL2_BOVIN] Probable pheromone carrier.
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''BOVINE LIPOCALIN ALLERGEN BOS D 2'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/1bj7_consurf.spt"</scriptWhenChecked>
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==Overview==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bj7 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
The three-dimensional structure of the major bovine allergen Bos d 2 has been determined by using x-ray diffraction at 1.8-A resolution. Structurally Bos d 2 is a member of the lipocalin family comprising proteins with transport functions. There is a flat small cavity inside the Bos d 2 protein core suitable for ligand binding, and it is possible that Glu115 and Asn37 inside the core are able to make hydrogen bonds with the ligand. Many allergens from different animals belong to the lipocalin family. The amino acid residue similarities between these lipocalins indicate putative regions for IgE binding. Comparison with the available allergen structures from other sources suggests that these allergens are roughly the same size and that their shape is more spherical than elliptical.
The three-dimensional structure of the major bovine allergen Bos d 2 has been determined by using x-ray diffraction at 1.8-A resolution. Structurally Bos d 2 is a member of the lipocalin family comprising proteins with transport functions. There is a flat small cavity inside the Bos d 2 protein core suitable for ligand binding, and it is possible that Glu115 and Asn37 inside the core are able to make hydrogen bonds with the ligand. Many allergens from different animals belong to the lipocalin family. The amino acid residue similarities between these lipocalins indicate putative regions for IgE binding. Comparison with the available allergen structures from other sources suggests that these allergens are roughly the same size and that their shape is more spherical than elliptical.
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==About this Structure==
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Probing the molecular basis of allergy. three-dimensional structure of the bovine lipocalin allergen Bos d 2.,Rouvinen J, Rautiainen J, Virtanen T, Zeiler T, Kauppinen J, Taivainen A, Mantyjarvi R J Biol Chem. 1999 Jan 22;274(4):2337-43. PMID:9891000<ref>PMID:9891000</ref>
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1BJ7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BJ7 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Probing the molecular basis of allergy. three-dimensional structure of the bovine lipocalin allergen Bos d 2., Rouvinen J, Rautiainen J, Virtanen T, Zeiler T, Kauppinen J, Taivainen A, Mantyjarvi R, J Biol Chem. 1999 Jan 22;274(4):2337-43. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9891000 9891000]
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</div>
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<div class="pdbe-citations 1bj7" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Rouvinen, J.]]
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[[Category: Rouvinen J]]
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[[Category: allergen]]
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[[Category: lipocalin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:02:06 2008''
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Current revision

BOVINE LIPOCALIN ALLERGEN BOS D 2

PDB ID 1bj7

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