5hbp

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'''Unreleased structure'''
 
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The entry 5hbp is ON HOLD until Paper Publication
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==The crystal of rhodanese domain of YgaP treated with SNOC==
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<StructureSection load='5hbp' size='340' side='right'caption='[[5hbp]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5hbp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HBP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HBP FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene>, <scene name='pdbligand=SNC:S-NITROSO-CYSTEINE'>SNC</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hbp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hbp OCA], [https://pdbe.org/5hbp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hbp RCSB], [https://www.ebi.ac.uk/pdbsum/5hbp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hbp ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YGAP_ECOLI YGAP_ECOLI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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S-Nitrosylation is well established as an important post-translational regulator in protein function and signaling. However, relatively little is known about its structural and dynamical consequences. We have investigated the effects of S-nitrosylation on the rhodanese domain of the Escherichia coli integral membrane protein YgaP by NMR, X-ray crystallography, and mass spectrometry. The results show that the active cysteine in the rhodanese domain of YgaP is subjected to two competing modifications: S-nitrosylation and S-sulfhydration, which are naturally occurring in vivo. It has been observed that in addition to inhibition of the sulfur transfer activity, S-nitrosylation of the active site residue Cys63 causes an increase in slow motion and a displacement of helix 5 due to a weakening of the interaction between the active site and the helix dipole. These findings provide an example of how nitrosative stress can exert action at the atomic level.
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Authors: Eichmann, C., Tzitzilonis, C., Nakamura, T., Kwiatkowski, W., Maslennikov, I., Choe, S., Lipton, S.A., Riek, R.
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S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein.,Eichmann C, Tzitzilonis C, Nakamura T, Kwiatkowski W, Maslennikov I, Choe S, Lipton SA, Riek R J Mol Biol. 2016 Jul 27. pii: S0022-2836(16)30255-8. doi:, 10.1016/j.jmb.2016.07.010. PMID:27473602<ref>PMID:27473602</ref>
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Description: The crystal of rhodanese domain of YgaP treated with SNOC
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Choe, S]]
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<div class="pdbe-citations 5hbp" style="background-color:#fffaf0;"></div>
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[[Category: Tzitzilonis, C]]
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== References ==
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[[Category: Kwiatkowski, W]]
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<references/>
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[[Category: Riek, R]]
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__TOC__
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[[Category: Lipton, S.A]]
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</StructureSection>
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[[Category: Eichmann, C]]
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[[Category: Escherichia coli]]
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[[Category: Maslennikov, I]]
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[[Category: Large Structures]]
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[[Category: Nakamura, T]]
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[[Category: Choe S]]
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[[Category: Eichmann C]]
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[[Category: Kwiatkowski W]]
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[[Category: Lipton SA]]
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[[Category: Maslennikov I]]
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[[Category: Nakamura T]]
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[[Category: Riek R]]
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[[Category: Tzitzilonis C]]

Current revision

The crystal of rhodanese domain of YgaP treated with SNOC

PDB ID 5hbp

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