4v17

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==Structure of a novel carbohydrate binding module from glycoside hydrolase family 5 glucanase from Ruminococcus flavefaciens FD-1==
==Structure of a novel carbohydrate binding module from glycoside hydrolase family 5 glucanase from Ruminococcus flavefaciens FD-1==
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<StructureSection load='4v17' size='340' side='right' caption='[[4v17]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='4v17' size='340' side='right'caption='[[4v17]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4v17]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V17 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4V17 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4v17]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminococcus_flavefaciens_FD-1 Ruminococcus flavefaciens FD-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V17 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V17 FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4v18|4v18]], [[4v1b|4v1b]], [[4v1i|4v1i]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4v17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v17 OCA], [http://pdbe.org/4v17 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4v17 RCSB], [http://www.ebi.ac.uk/pdbsum/4v17 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v17 OCA], [https://pdbe.org/4v17 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v17 RCSB], [https://www.ebi.ac.uk/pdbsum/4v17 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v17 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/A0A140UH28_RUMFL A0A140UH28_RUMFL]
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Anaerobic bacteria organize carbohydrate-active enzymes into a multi-component complex, the cellulosome, which degrades cellulose and hemicellulose highly efficiently. Genome sequencing of Ruminococcus flavefaciens FD-1 offers extensive information on the range and diversity of the enzymatic and structural components of the cellulosome. The R. flavefaciens FD-1 genome encodes over 200 dockerin-containing proteins, most of which are of unknown function. One of these modular proteins comprises a glycoside hydrolase family 5 catalytic module (GH5) linked to an unclassified carbohydrate-binding module (CBM-Rf1) and a dockerin. The novel CBM-Rf1 has been purified and crystallized. The crystals belonged to the trigonal space group R32:H. The CBM-Rf1 structure was determined by a multiple-wavelength anomalous dispersion experiment using AutoSol from the PHENIX suite using both selenomethionyl-derivative and native data to resolutions of 2.28 and 2.0 A, respectively.
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Expression, purification and crystallization of a novel carbohydrate-binding module from the Ruminococcus flavefaciens cellulosome.,Venditto I, Centeno MS, Ferreira LM, Fontes CM, Najmudin S Acta Crystallogr F Struct Biol Commun. 2014 Dec 1;70(Pt 12):1653-6. doi:, 10.1107/S2053230X14024248. Epub 2014 Nov 14. PMID:25484220<ref>PMID:25484220</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4v17" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Centeno, M S.J]]
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[[Category: Large Structures]]
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[[Category: Ferreira, L M.A]]
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[[Category: Ruminococcus flavefaciens FD-1]]
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[[Category: Fontes, C M.G A]]
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[[Category: Centeno MSJ]]
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[[Category: Najmudin, S]]
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[[Category: Ferreira LMA]]
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[[Category: Venditto, I]]
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[[Category: Fontes CMGA]]
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[[Category: Sugar binding protein]]
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[[Category: Najmudin S]]
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[[Category: Venditto I]]

Current revision

Structure of a novel carbohydrate binding module from glycoside hydrolase family 5 glucanase from Ruminococcus flavefaciens FD-1

PDB ID 4v17

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