This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4x57

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:41, 27 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex==
==Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex==
-
<StructureSection load='4x57' size='340' side='right' caption='[[4x57]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='4x57' size='340' side='right'caption='[[4x57]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4x57]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X57 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X57 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4x57]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X57 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ubiquitin--protein_ligase Ubiquitin--protein ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.19 6.3.2.19] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x57 OCA], [http://pdbe.org/4x57 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x57 RCSB], [http://www.ebi.ac.uk/pdbsum/4x57 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x57 OCA], [https://pdbe.org/4x57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x57 RCSB], [https://www.ebi.ac.uk/pdbsum/4x57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x57 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/UBC8_ARATH UBC8_ARATH]] Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.<ref>PMID:16339806</ref> [[http://www.uniprot.org/uniprot/MUB3_ARATH MUB3_ARATH]] May serve as docking site to facilitate the association of other proteins to the plasma membrane.
+
[https://www.uniprot.org/uniprot/UBC8_ARATH UBC8_ARATH] Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.<ref>PMID:16339806</ref>
 +
 
 +
==See Also==
 +
*[[3D structures of ubiquitin conjugating enzyme|3D structures of ubiquitin conjugating enzyme]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ubiquitin--protein ligase]]
+
[[Category: Arabidopsis thaliana]]
-
[[Category: Downes, B]]
+
[[Category: Large Structures]]
-
[[Category: Korolev, S]]
+
[[Category: Downes B]]
-
[[Category: Koroleva, O]]
+
[[Category: Korolev S]]
-
[[Category: Lu, X]]
+
[[Category: Koroleva O]]
-
[[Category: E1:e2 complex]]
+
[[Category: Lu X]]
-
[[Category: Ligase-protein binding complex]]
+
-
[[Category: Membrane anchored]]
+
-
[[Category: Mub3]]
+
-
[[Category: Ubiquitin]]
+
-
[[Category: Ubiquitin-fold protein 3]]
+

Current revision

Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex

PDB ID 4x57

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools