1bub

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[[Image:1bub.gif|left|200px]]
 
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{{Structure
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==DETERMINATION OF INTERNUCLEAR ANGLES OF DNA USING PARAMAGNETIC ASSISTED MAGNETIC ALIGNMENT==
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|PDB= 1bub |SIZE=350|CAPTION= <scene name='initialview01'>1bub</scene>
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<StructureSection load='1bub' size='340' side='right'caption='[[1bub]]' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>
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<table><tr><td colspan='2'>[[1bub]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BUB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BUB FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bub OCA], [https://pdbe.org/1bub PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bub RCSB], [https://www.ebi.ac.uk/pdbsum/1bub PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bub ProSAT]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bub OCA], [http://www.ebi.ac.uk/pdbsum/1bub PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bub RCSB]</span>
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<div style="background-color:#fffaf0;">
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}}
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== Publication Abstract from PubMed ==
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'''DETERMINATION OF INTERNUCLEAR ANGLES OF DNA USING PARAMAGNETIC ASSISTED MAGNETIC ALIGNMENT'''
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==Overview==
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Paramagnetic ions have been used to assist the magnetic alignment of DNA. The anisotropy of the binding sites is sufficient to give rise to significant alignment of the DNA with the observed proton-carbon dipolar couplings spanning a 70-Hz range. The dipolar couplings have been used to determine the positions of the axial and rhombic alignment axes. The positions of the alignment axes relative to the positions of the binding sites of the paramagnetic europium ions have also been determined.
Paramagnetic ions have been used to assist the magnetic alignment of DNA. The anisotropy of the binding sites is sufficient to give rise to significant alignment of the DNA with the observed proton-carbon dipolar couplings spanning a 70-Hz range. The dipolar couplings have been used to determine the positions of the axial and rhombic alignment axes. The positions of the alignment axes relative to the positions of the binding sites of the paramagnetic europium ions have also been determined.
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==About this Structure==
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Determination of internuclear angles of DNA using paramagnetic-assisted magnetic alignment.,Beger RD, Marathias VM, Volkman BF, Bolton PH J Magn Reson. 1998 Nov;135(1):256-9. PMID:9799703<ref>PMID:9799703</ref>
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1BUB is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BUB OCA].
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==Reference==
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Determination of internuclear angles of DNA using paramagnetic-assisted magnetic alignment., Beger RD, Marathias VM, Volkman BF, Bolton PH, J Magn Reson. 1998 Nov;135(1):256-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9799703 9799703]
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[[Category: Protein complex]]
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[[Category: Beger, R D.]]
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[[Category: Bolton, P H.]]
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[[Category: Marathias, V M.]]
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[[Category: duplex]]
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[[Category: eu binding dna]]
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[[Category: qudraplex dna]]
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[[Category: telomere dna]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:08:30 2008''
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1bub" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Beger RD]]
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[[Category: Bolton PH]]
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[[Category: Marathias VM]]

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DETERMINATION OF INTERNUCLEAR ANGLES OF DNA USING PARAMAGNETIC ASSISTED MAGNETIC ALIGNMENT

PDB ID 1bub

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