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Circadian clock protein

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<StructureSection load='1r8j' size='350' side='right' caption='Circadian clock protein KaiA (PDB entry [[1r8j]])' scene='53/536683/Cv/1'>
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<StructureSection load='' size='350' side='right' caption='Circadian clock protein KaiA (PDB entry [[1r8j]])' scene='53/536683/Cv/1'>
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'''Circadian clock proteins''' measure out the 24 hour circadian rhythm. In cyanobacteria protein KaiA<ref>PMID:15007067</ref> stimulates KaiC<ref>PMID:15304218</ref> which adds phosphate groups to itself. Then KaiC binds to KaiB<ref>PMID:15716247</ref> which inactivates KaiA and causes the number of phosphate groups on KaiC to drop slowly. KaiB disconnects allowing KaiA to start the cycle again.<ref>PMID:11687489</ref> For details of KaiC see [[Circadian Clock Protein KaiC]].
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'''Circadian clock proteins''' or '''Circadian clock protein kinase''' measure out the 24 hour circadian rhythm. In cyanobacteria protein KaiA<ref>PMID:15007067</ref> stimulates KaiC<ref>PMID:15304218</ref> which adds phosphate groups to itself. Then '''KaiC''' binds to '''KaiB'''<ref>PMID:15716247</ref> which inactivates '''KaiA''' and causes the number of phosphate groups on KaiC to drop slowly. KaiB disconnects allowing KaiA to start the cycle again.<ref>PMID:11687489</ref> For details of KaiC see [[Circadian Clock Protein KaiC]].
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Circadian clock protein KaiA from ''Synechococcus elongatus'' is <scene name='53/536683/Cv/2'>homodimer</scene> (PDB entry [[1r8j]]).
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Circadian clock protein KaiA from ''Synechococcus elongatus'' is <scene name='53/536683/Cv/2'>homodimer</scene> (PDB entry [[1r8j]]).<ref>PMID:15007067</ref>
 
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</StructureSection>
 
== 3D Structures of circadian clock protein ==
== 3D Structures of circadian clock protein ==
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[[Circadian clock protein 3D structures]]
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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</StructureSection>
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{{#tree:id=OrganizedByTopic|openlevels=0|
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*KaiA
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**[[1r5q]] – NoKaiA - Nostoc<br />
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**[[1m2e]], [[1m2f]] – SeKaiA N terminal – ''Synechococcus elongatus'' - NMR <br />
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**[[1q6a]], [[1q6b]] – SeKaiA C terminal - NMR <br />
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**[[1v2z]] – SeKaiA C terminal <br />
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**[[1r8j]] – SeKaiA <br />
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**[[1suy]], [[1sv1]] – SeKaiA C terminal + KaiC peptide - NMR <br />
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**[[4g86]] – SeKaiA + DBMIB<br />
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*KaiB
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**[[1r5p]] – NoKaiB <br />
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**[[1wwj]] – SyKaiB - ''Synechocystis''<br />
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**[[1vgl]], [[2qke]], [[4kso]] – SeKaiB <br />
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*KaiC
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**[[1tf7]], [[2gbl]] – SyKaiC <br />
 
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**[[1u9i]], [[3dvl]], [[3jzm]], [[3k09]], [[3k0a]], [[3k0c]], [[3k0e]], [[3k0f]], [[3s1a]], [[4dug]], [[4ijm]] – SeKaiC (mutant) <br />
 
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}}
 
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Circadian clock protein KaiA (PDB entry 1r8j)

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References

  1. Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC. Crystal structure of circadian clock protein KaiA from Synechococcus elongatus. J Biol Chem. 2004 May 7;279(19):20511-8. Epub 2004 Mar 8. PMID:15007067 doi:10.1074/jbc.M400077200
  2. Pattanayek R, Wang J, Mori T, Xu Y, Johnson CH, Egli M. Visualizing a circadian clock protein: crystal structure of KaiC and functional insights. Mol Cell. 2004 Aug 13;15(3):375-88. PMID:15304218 doi:10.1016/j.molcel.2004.07.013
  3. . PMID:15716247
  4. Harmer SL, Panda S, Kay SA. Molecular bases of circadian rhythms. Annu Rev Cell Dev Biol. 2001;17:215-53. PMID:11687489 doi:http://dx.doi.org/10.1146/annurev.cellbio.17.1.215

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