1l8x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:10, 16 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Ferrochelatase from the Yeast, Saccharomyces cerevisiae, with Cobalt(II) as the Substrate Ion==
==Crystal Structure of Ferrochelatase from the Yeast, Saccharomyces cerevisiae, with Cobalt(II) as the Substrate Ion==
-
<StructureSection load='1l8x' size='340' side='right' caption='[[1l8x]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='1l8x' size='340' side='right'caption='[[1l8x]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1l8x]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L8X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1L8X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1l8x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L8X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L8X FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HEMZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferrochelatase Ferrochelatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.99.1.1 4.99.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l8x OCA], [https://pdbe.org/1l8x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l8x RCSB], [https://www.ebi.ac.uk/pdbsum/1l8x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l8x ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1l8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l8x OCA], [http://pdbe.org/1l8x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1l8x RCSB], [http://www.ebi.ac.uk/pdbsum/1l8x PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HEMH_YEAST HEMH_YEAST]] Catalyzes the ferrous insertion into protoporphyrin IX.[HAMAP-Rule:MF_00323]
+
[https://www.uniprot.org/uniprot/HEMH_YEAST HEMH_YEAST] Catalyzes the ferrous insertion into protoporphyrin IX.[HAMAP-Rule:MF_00323]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/1l8x_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/1l8x_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 31:
==See Also==
==See Also==
-
*[[Ferrochelatase|Ferrochelatase]]
+
*[[Ferrochelatase 3D structures|Ferrochelatase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
+
[[Category: Large Structures]]
-
[[Category: Ferrochelatase]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Al-Karadaghi, S]]
+
[[Category: Al-Karadaghi S]]
-
[[Category: Gora, M]]
+
[[Category: Gora M]]
-
[[Category: Hansson, M]]
+
[[Category: Hansson M]]
-
[[Category: Karlberg, T]]
+
[[Category: Karlberg T]]
-
[[Category: Labbe-Bois, R]]
+
[[Category: Labbe-Bois R]]
-
[[Category: Lecerof, D]]
+
[[Category: Lecerof D]]
-
[[Category: Silvegren, G]]
+
[[Category: Silvegren G]]
-
[[Category: Cobalt]]
+
-
[[Category: Ferro-lyase]]
+
-
[[Category: Heme biosynthesis]]
+
-
[[Category: Lyase]]
+
-
[[Category: Mitochondrial inner membrane protein]]
+
-
[[Category: Porphyrin metallation]]
+
-
[[Category: Protoheme]]
+

Current revision

Crystal Structure of Ferrochelatase from the Yeast, Saccharomyces cerevisiae, with Cobalt(II) as the Substrate Ion

PDB ID 1l8x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools