2bsd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:18, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==STRUCTURE OF LACTOCOCCAL BACTERIOPHAGE P2 RECEPTOR BINDING PROTEIN==
+
 
-
<StructureSection load='2bsd' size='340' side='right' caption='[[2bsd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
==Structure of Lactococcal Bacteriophage p2 Receptor Binding Protein==
 +
<StructureSection load='2bsd' size='340' side='right'caption='[[2bsd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2bsd]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpp2 Bpp2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BSD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BSD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2bsd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BSD FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bse|2bse]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bsd OCA], [http://pdbe.org/2bsd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bsd RCSB], [http://www.ebi.ac.uk/pdbsum/2bsd PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bsd OCA], [https://pdbe.org/2bsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bsd RCSB], [https://www.ebi.ac.uk/pdbsum/2bsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bsd ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RBP_BPLP2 RBP_BPLP2] Binds to the host phosphopolysaccharides at the onset of infection. Upon activation by calcium, the receptor binding proteins change their conformation, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA ejection.<ref>PMID:20351260</ref> <ref>PMID:24027307</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bs/2bsd_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bs/2bsd_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 29: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bpp2]]
+
[[Category: Escherichia virus P2]]
-
[[Category: Cambillau, C]]
+
[[Category: Large Structures]]
-
[[Category: Dehaard, H J.W]]
+
[[Category: Cambillau C]]
-
[[Category: Desmyter, A]]
+
[[Category: Dehaard HJW]]
-
[[Category: Moineau, S]]
+
[[Category: Desmyter A]]
-
[[Category: Spinelli, S]]
+
[[Category: Moineau S]]
-
[[Category: Verrips, C T]]
+
[[Category: Spinelli S]]
-
[[Category: Lactococcus lacti]]
+
[[Category: Verrips CT]]
-
[[Category: Llama vhh]]
+
-
[[Category: Phage]]
+
-
[[Category: Receptor]]
+
-
[[Category: Receptor binding protein]]
+

Current revision

Structure of Lactococcal Bacteriophage p2 Receptor Binding Protein

PDB ID 2bsd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools