3dbm

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==Crystal Structure of Allene oxide synthase==
==Crystal Structure of Allene oxide synthase==
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<StructureSection load='3dbm' size='340' side='right' caption='[[3dbm]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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<StructureSection load='3dbm' size='340' side='right'caption='[[3dbm]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3dbm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Guayule_rubber_plant Guayule rubber plant]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DBM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3dbm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Parthenium_argentatum Parthenium argentatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DBM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HO2:(9E,11E,13S)-13-HYDROXYOCTADECA-9,11-DIENOIC+ACID'>HO2</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dam|3dam]], [[3dan|3dan]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HO2:(9E,11E,13S)-13-HYDROXYOCTADECA-9,11-DIENOIC+ACID'>HO2</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CYP74A2, RPP30 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=35935 Guayule rubber plant])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbm OCA], [https://pdbe.org/3dbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dbm RCSB], [https://www.ebi.ac.uk/pdbsum/3dbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbm ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroperoxide_dehydratase Hydroperoxide dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.92 4.2.1.92] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbm OCA], [http://pdbe.org/3dbm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dbm RCSB], [http://www.ebi.ac.uk/pdbsum/3dbm PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/C74A2_PARAR C74A2_PARAR]] Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides (By similarity).
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[https://www.uniprot.org/uniprot/C74A2_PARAR C74A2_PARAR] Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbm_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbm_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
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*[[Cytochrome P450|Cytochrome P450]]
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*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Guayule rubber plant]]
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[[Category: Large Structures]]
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[[Category: Hydroperoxide dehydratase]]
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[[Category: Parthenium argentatum]]
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[[Category: Li, L]]
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[[Category: Li L]]
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[[Category: Wang, X]]
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[[Category: Wang X]]
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[[Category: Crystal structure hem hode ao]]
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[[Category: Fatty acid biosynthesis]]
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[[Category: Heme]]
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[[Category: Iron]]
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[[Category: Lipid synthesis]]
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[[Category: Lyase]]
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[[Category: Metal-binding]]
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[[Category: Oxylipin biosynthesis]]
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Current revision

Crystal Structure of Allene oxide synthase

PDB ID 3dbm

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