2vom

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:26, 13 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==STRUCTURAL BASIS OF HUMAN TRIOSEPHOSPHATE ISOMERASE DEFICIENCY. MUTATION E104D AND CORRELATION TO SOLVENT PERTURBATION.==
+
 
-
<StructureSection load='2vom' size='340' side='right' caption='[[2vom]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
==Structural basis of human triosephosphate isomerase deficiency. Mutation E104D and correlation to solvent perturbation.==
 +
<StructureSection load='2vom' size='340' side='right'caption='[[2vom]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2vom]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VOM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VOM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2vom]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VOM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VOM FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1wyi|1wyi]], [[1hti|1hti]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Triose-phosphate_isomerase Triose-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.1 5.3.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vom FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vom OCA], [https://pdbe.org/2vom PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vom RCSB], [https://www.ebi.ac.uk/pdbsum/2vom PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vom ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vom FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vom OCA], [http://pdbe.org/2vom PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vom RCSB], [http://www.ebi.ac.uk/pdbsum/2vom PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/TPIS_HUMAN TPIS_HUMAN] Defects in TPI1 are the cause of triosephosphate isomerase deficiency (TPI deficiency) [MIM:[https://omim.org/entry/190450 190450]. TPI deficiency is an autosomal recessive disorder. It is the most severe clinical disorder of glycolysis. It is associated with neonatal jaundice, chronic hemolytic anemia, progressive neuromuscular dysfunction, cardiomyopathy and increased susceptibility to infection.
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TPIS_HUMAN TPIS_HUMAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vo/2vom_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vo/2vom_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 28: Line 32:
==See Also==
==See Also==
-
*[[Triose Phosphate Isomerase|Triose Phosphate Isomerase]]
+
*[[Triose phosphate isomerase 3D structures|Triose phosphate isomerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Triose-phosphate isomerase]]
+
[[Category: Large Structures]]
-
[[Category: Aguirre-Lopez, B]]
+
[[Category: Aguirre-Lopez B]]
-
[[Category: Arreola-Alemon, R]]
+
[[Category: Arreola-Alemon R]]
-
[[Category: Costas, M]]
+
[[Category: Costas M]]
-
[[Category: Gomez-Puyou, A]]
+
[[Category: Gomez-Puyou A]]
-
[[Category: Gomez-Puyou, M T.De]]
+
[[Category: Perez-Montfort R]]
-
[[Category: Perez-Montfort, R]]
+
[[Category: Rodriguez-Almazan C]]
-
[[Category: Rodriguez-Almazan, C]]
+
[[Category: Rodriguez-Larrea D]]
-
[[Category: Rodriguez-Larrea, D]]
+
[[Category: Torres-Larios A]]
-
[[Category: Torres-Larios, A]]
+
[[Category: De Gomez-Puyou MT]]
-
[[Category: Disease mutation]]
+
-
[[Category: Fatty acid biosynthesis]]
+
-
[[Category: Gluconeogenesis]]
+
-
[[Category: Glycolysis]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Lipid synthesis]]
+
-
[[Category: Pentose shunt]]
+
-
[[Category: Phosphoprotein]]
+

Current revision

Structural basis of human triosephosphate isomerase deficiency. Mutation E104D and correlation to solvent perturbation.

PDB ID 2vom

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools