This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2oa9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:16, 28 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Restriction endonuclease MvaI in the absence of DNA==
==Restriction endonuclease MvaI in the absence of DNA==
-
<StructureSection load='2oa9' size='340' side='right' caption='[[2oa9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='2oa9' size='340' side='right'caption='[[2oa9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2oa9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_15306 Atcc 15306]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OA9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OA9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2oa9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Kocuria_varians Kocuria varians]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OA9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2oaa|2oaa]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mvaIR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1272 ATCC 15306])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oa9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oa9 OCA], [https://pdbe.org/2oa9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oa9 RCSB], [https://www.ebi.ac.uk/pdbsum/2oa9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oa9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oa9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oa9 OCA], [http://pdbe.org/2oa9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2oa9 RCSB], [http://www.ebi.ac.uk/pdbsum/2oa9 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8RNV5_KOCVA Q8RNV5_KOCVA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oa9_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oa9_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 15306]]
+
[[Category: Kocuria varians]]
-
[[Category: Bochtler, M]]
+
[[Category: Large Structures]]
-
[[Category: Czapinska, H]]
+
[[Category: Bochtler M]]
-
[[Category: Kaus-Drobek, M]]
+
[[Category: Czapinska H]]
-
[[Category: Siksnys, V]]
+
[[Category: Kaus-Drobek M]]
-
[[Category: Sokolowska, M]]
+
[[Category: Siksnys V]]
-
[[Category: Szczepanowski, R H]]
+
[[Category: Sokolowska M]]
-
[[Category: Tamulaitis, G]]
+
[[Category: Szczepanowski RH]]
-
[[Category: Urbanke, K]]
+
[[Category: Tamulaitis G]]
-
[[Category: Hydrolase]]
+
[[Category: Urbanke K]]
-
[[Category: Monomeric endonuclease]]
+
-
[[Category: Mvai]]
+
-
[[Category: Restriction enzyme]]
+

Current revision

Restriction endonuclease MvaI in the absence of DNA

PDB ID 2oa9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2oa9"
Personal tools