2yzc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:55, 6 August 2025) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate==
==Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate==
-
<StructureSection load='2yzc' size='340' side='right' caption='[[2yzc]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
+
<StructureSection load='2yzc' size='340' side='right'caption='[[2yzc]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2yzc]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2yzc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1AL:ALLANTOATE+ION'>1AL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vax|1vax]], [[1vay|1vay]], [[1uox|1uox]], [[2yzb|2yzb]], [[2yzd|2yzd]], [[2yze|2yze]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1AL:ALLANTOATE+ION'>1AL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Factor_independent_urate_hydroxylase Factor independent urate hydroxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.3.3 1.7.3.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzc OCA], [https://pdbe.org/2yzc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzc RCSB], [https://www.ebi.ac.uk/pdbsum/2yzc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzc OCA], [http://pdbe.org/2yzc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yzc RCSB], [http://www.ebi.ac.uk/pdbsum/2yzc PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/URIC_ARTGO URIC_ARTGO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzc_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzc_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
==See Also==
==See Also==
-
*[[Urate Oxidase|Urate Oxidase]]
+
*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arthrobacter globiformis]]
[[Category: Arthrobacter globiformis]]
-
[[Category: Factor independent urate hydroxylase]]
+
[[Category: Large Structures]]
-
[[Category: Hoque, M M]]
+
[[Category: Hoque MM]]
-
[[Category: Hossain, M T]]
+
[[Category: Hossain MT]]
-
[[Category: Juan, E C.M]]
+
[[Category: Juan ECM]]
-
[[Category: Sekiguchi, T]]
+
[[Category: Sekiguchi T]]
-
[[Category: Suzuki, K]]
+
[[Category: Suzuki K]]
-
[[Category: Takenaka, A]]
+
[[Category: Takenaka A]]
-
[[Category: Allantoate]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Uricase]]
+

Current revision

Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate

PDB ID 2yzc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools