1du5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 6 November 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1du5.jpg|left|200px]]
 
-
{{Structure
+
==THE CRYSTAL STRUCTURE OF ZEAMATIN.==
-
|PDB= 1du5 |SIZE=350|CAPTION= <scene name='initialview01'>1du5</scene>, resolution 2.5&Aring;
+
<StructureSection load='1du5' size='340' side='right'caption='[[1du5]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1du5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DU5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DU5 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1du5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1du5 OCA], [https://pdbe.org/1du5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1du5 RCSB], [https://www.ebi.ac.uk/pdbsum/1du5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1du5 ProSAT]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1du5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1du5 OCA], [http://www.ebi.ac.uk/pdbsum/1du5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1du5 RCSB]</span>
+
[https://www.uniprot.org/uniprot/ZEAM_MAIZE ZEAM_MAIZE] Has antifungal activity. Inhibits Candida albicans and Trichoderma reesei; marginal inhibition observed against Alternaria solani and Neurospora crassa.
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''THE CRYSTAL STRUCTURE OF ZEAMATIN.'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/1du5_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
1DU5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DU5 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==Reference==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1du5 ConSurf].
-
The crystal structure of the antifungal protein zeamatin, a member of the thaumatin-like, PR-5 protein family., Batalia MA, Monzingo AF, Ernst S, Roberts W, Robertus JD, Nat Struct Biol. 1996 Jan;3(1):19-23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8548448 8548448]
+
<div style="clear:both"></div>
-
[[Category: Single protein]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Zea mays]]
[[Category: Zea mays]]
-
[[Category: Batalia, M A.]]
+
[[Category: Batalia MA]]
-
[[Category: Ernst, S.]]
+
[[Category: Ernst S]]
-
[[Category: Monzingo, A F.]]
+
[[Category: Monzingo AF]]
-
[[Category: Roberts, W.]]
+
[[Category: Roberts W]]
-
[[Category: Robertus, J D.]]
+
[[Category: Robertus JD]]
-
[[Category: beta sandwich]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:48:52 2008''
+

Current revision

THE CRYSTAL STRUCTURE OF ZEAMATIN.

PDB ID 1du5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools