This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1vyu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:27, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==BETA3 SUBUNIT OF VOLTAGE-GATED CA2+-CHANNEL==
+
 
-
<StructureSection load='1vyu' size='340' side='right' caption='[[1vyu]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
==Beta3 subunit of Voltage-gated Ca2+-channel==
 +
<StructureSection load='1vyu' size='340' side='right'caption='[[1vyu]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1vyu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VYU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VYU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1vyu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VYU FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vyt|1vyt]], [[1vyv|1vyv]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vyu OCA], [http://pdbe.org/1vyu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vyu RCSB], [http://www.ebi.ac.uk/pdbsum/1vyu PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vyu OCA], [https://pdbe.org/1vyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vyu RCSB], [https://www.ebi.ac.uk/pdbsum/1vyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vyu ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CACB3_RAT CACB3_RAT]] The beta subunit of voltage-dependent calcium channels contributes to the function of the calcium channel by increasing peak calcium current, shifting the voltage dependencies of activation and inactivation, modulating G protein inhibition and controlling the alpha-1 subunit membrane targeting.
+
[https://www.uniprot.org/uniprot/CACB3_RAT CACB3_RAT] The beta subunit of voltage-dependent calcium channels contributes to the function of the calcium channel by increasing peak calcium current, shifting the voltage dependencies of activation and inactivation, modulating G protein inhibition and controlling the alpha-1 subunit membrane targeting.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/1vyu_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/1vyu_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 31:
==See Also==
==See Also==
-
*[[Ion channels|Ion channels]]
+
*[[Ion channels 3D structures|Ion channels 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
+
[[Category: Large Structures]]
-
[[Category: Chen, Y H]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Fitzmaurice, A]]
+
[[Category: Chen Y-H]]
-
[[Category: He, L L]]
+
[[Category: Fitzmaurice A]]
-
[[Category: Li, M H]]
+
[[Category: He L-L]]
-
[[Category: Liang, T]]
+
[[Category: Li M-H]]
-
[[Category: Yamada, Y]]
+
[[Category: Liang T]]
-
[[Category: Yang, J]]
+
[[Category: Yamada Y]]
-
[[Category: Yang, S]]
+
[[Category: Yang J]]
-
[[Category: Zhang, H]]
+
[[Category: Yang S]]
-
[[Category: Zhang, Y]]
+
[[Category: Zhang H]]
-
[[Category: Aid doamin]]
+
[[Category: Zhang Y]]
-
[[Category: Calcium channel beta subunit]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Ionic channel]]
+
-
[[Category: Sh3 domain]]
+
-
[[Category: Voltage-gated channel]]
+

Current revision

Beta3 subunit of Voltage-gated Ca2+-channel

PDB ID 1vyu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vyu"
Personal tools