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1k0h

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Solution structure of bacteriophage lambda gpFII

Structural highlights

1k0h is a 1 chain structure with sequence from Escherichia virus Lambda. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	Solution NMR
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FII_LAMBD Plays a role in virion assembly by joining the head and the tail at the last step of morphogenesis. Six FII proteins bind the DNA-filled capsid after W binding, in turn binding the pre-assembled tail by interacting with U protein.^[1] ^[2] ^[3]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The bacteriophage lambda FII protein (gpFII) is a 117 residue structural protein found in the phage particle that is required for the joining of phage heads and tails at the last step of morphogenesis. We have performed biophysical experiments to show that gpFII is stable, monomeric, and reversibly folded. We have also determined the atomic resolution structure of gpFII using NMR spectroscopy. gpFII is shown to possess a novel fold consisting of seven beta-strands and a short alpha-helix. It also displays two large unstructured regions at the N terminus (residues 1-24) and in a large loop near the middle of the protein (residues 46-62). We speculate that these unstructured regions become structured when gpFII assembles into the phage particle, and that these conformational changes play an important role in regulating the assembly pathway. Alignment of the gpFII sequence with those of homologues from other lambdoid phages has allowed us to putatively identify distinct surfaces on the gpFII structure that mediate binding to the phage head and tail.

The solution structure of the bacteriophage lambda head-tail joining protein, gpFII.,Maxwell KL, Yee AA, Arrowsmith CH, Gold M, Davidson AR J Mol Biol. 2002 May 17;318(5):1395-404. PMID:12083526^[4]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Boklage CE, Wong EC, Bode VC. Functional abnormality of lambda phage particles from complemented FII-mutant lysates. Virology. 1974 Sep;61(1):22-8. PMID:4413519
↑ Casjens S. Bacteriophage lambda FII gene protein: role in head assembly. J Mol Biol. 1974 Nov 25;90(1):1-20. PMID:4616093
↑ Casjens S, Horn T, Kaiser AD. Head assembly steps controlled by genes F and W in bacteriophage lambda. J Mol Biol. 1972 Mar 14;64(3):551-63. PMID:5022189
↑ Maxwell KL, Yee AA, Arrowsmith CH, Gold M, Davidson AR. The solution structure of the bacteriophage lambda head-tail joining protein, gpFII. J Mol Biol. 2002 May 17;318(5):1395-404. PMID:12083526

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1k0h"

@@ Line 1: / Line 1: @@
 ==Solution structure of bacteriophage lambda gpFII==
-<StructureSection load='1k0h' size='340' side='right' caption='[[1k0h]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
+<StructureSection load='1k0h' size='340' side='right'caption='[[1k0h]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1k0h]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteriophage_lambda Bacteriophage lambda]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K0H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K0H FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1k0h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_Lambda Escherichia virus Lambda]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K0H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K0H FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10710 Bacteriophage lambda])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k0h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k0h OCA], [http://pdbe.org/1k0h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k0h RCSB], [http://www.ebi.ac.uk/pdbsum/1k0h PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k0h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k0h OCA], [https://pdbe.org/1k0h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k0h RCSB], [https://www.ebi.ac.uk/pdbsum/1k0h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k0h ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/FII_LAMBD FII_LAMBD]] Plays a role in virion assembly by joining the head and the tail at the last step of morphogenesis. Six FII proteins bind the DNA-filled capsid after W binding, in turn binding the pre-assembled tail by interacting with U protein.<ref>PMID:4413519</ref> <ref>PMID:4616093</ref> <ref>PMID:5022189</ref>
+[https://www.uniprot.org/uniprot/FII_LAMBD FII_LAMBD] Plays a role in virion assembly by joining the head and the tail at the last step of morphogenesis. Six FII proteins bind the DNA-filled capsid after W binding, in turn binding the pre-assembled tail by interacting with U protein.<ref>PMID:4413519</ref> <ref>PMID:4616093</ref> <ref>PMID:5022189</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
   <jmolCheckbox>
-    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k0/1k0h_consurf.spt"</scriptWhenChecked>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k0/1k0h_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 31: / Line 32: @@
 __TOC__
 </StructureSection>
-[[Category: Bacteriophage lambda]]
+[[Category: Escherichia virus Lambda]]
-[[Category: Arrowsmith, C H]]
+[[Category: Large Structures]]
-[[Category: Davidson, A R]]
+[[Category: Arrowsmith CH]]
-[[Category: Gold, M]]
+[[Category: Davidson AR]]
-[[Category: Maxwell, K L]]
+[[Category: Gold M]]
-[[Category: Yee, A A]]
+[[Category: Maxwell KL]]
-[[Category: Twisted beta-sandwich]]
+[[Category: Yee AA]]
-[[Category: Viral protein]]

1k0h

From Proteopedia

Current revision

Solution structure of bacteriophage lambda gpFII

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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