This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2eki

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:51, 29 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structures of the TGS domain of human developmentally-regulated GTP-binding protein 1==
==Solution structures of the TGS domain of human developmentally-regulated GTP-binding protein 1==
-
<StructureSection load='2eki' size='340' side='right' caption='[[2eki]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2eki' size='340' side='right'caption='[[2eki]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2eki]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EKI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2eki]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EKI FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DRG1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eki OCA], [http://pdbe.org/2eki PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eki RCSB], [http://www.ebi.ac.uk/pdbsum/2eki PDBsum], [http://www.topsan.org/Proteins/RSGI/2eki TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eki OCA], [https://pdbe.org/2eki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eki RCSB], [https://www.ebi.ac.uk/pdbsum/2eki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eki ProSAT], [https://www.topsan.org/Proteins/RSGI/2eki TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DRG1_HUMAN DRG1_HUMAN]] Critical regulator of cell growth under specific conditions. Implicated in differentiation and cell cycle arrest.
+
[https://www.uniprot.org/uniprot/DRG1_HUMAN DRG1_HUMAN] Critical regulator of cell growth under specific conditions. Implicated in differentiation and cell cycle arrest.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2eki_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2eki_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 21:
==See Also==
==See Also==
-
*[[GTP-binding protein|GTP-binding protein]]
+
*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Harada, T]]
+
[[Category: Large Structures]]
-
[[Category: Kigawa, T]]
+
[[Category: Harada T]]
-
[[Category: Koshiba, S]]
+
[[Category: Kigawa T]]
-
[[Category: Structural genomic]]
+
[[Category: Koshiba S]]
-
[[Category: Sato, M]]
+
[[Category: Sato M]]
-
[[Category: Watanabe, S]]
+
[[Category: Watanabe S]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Drg]]
+
-
[[Category: Drg 1]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nedd-3]]
+
-
[[Category: Nedd3]]
+
-
[[Category: Neural precursor cell expressed developmentally down-regulated protein 3]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Protein nedd3]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Signaling protein]]
+

Current revision

Solution structures of the TGS domain of human developmentally-regulated GTP-binding protein 1

PDB ID 2eki

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools