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1j1h

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==Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus==
==Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus==
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<StructureSection load='1j1h' size='340' side='right' caption='[[1j1h]], [[NMR_Ensembles_of_Models | 11 NMR models]]' scene=''>
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<StructureSection load='1j1h' size='340' side='right'caption='[[1j1h]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1j1h]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J1H FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1j1h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J1H FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1h OCA], [http://pdbe.org/1j1h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j1h RCSB], [http://www.ebi.ac.uk/pdbsum/1j1h PDBsum], [http://www.topsan.org/Proteins/RSGI/1j1h TOPSAN]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1h OCA], [https://pdbe.org/1j1h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j1h RCSB], [https://www.ebi.ac.uk/pdbsum/1j1h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j1h ProSAT], [https://www.topsan.org/Proteins/RSGI/1j1h TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SSRP_THET8 SSRP_THET8]] Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes (By similarity).
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[https://www.uniprot.org/uniprot/SSRP_THET8 SSRP_THET8] Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1h_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1h_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Flavobacterium thermophilum yoshida and oshima 1971]]
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[[Category: Large Structures]]
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[[Category: Fujii, M]]
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[[Category: Thermus thermophilus]]
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[[Category: Hatanaka, H]]
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[[Category: Fujii M]]
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[[Category: Hosoi, H]]
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[[Category: Hatanaka H]]
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[[Category: Inoue, Y]]
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[[Category: Hosoi H]]
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[[Category: Kawai, G]]
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[[Category: Inoue Y]]
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[[Category: Kuramitsu, S]]
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[[Category: Kawai G]]
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[[Category: Nameki, N]]
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[[Category: Kuramitsu S]]
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[[Category: Structural genomic]]
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[[Category: Nameki N]]
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[[Category: Shibata, T]]
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[[Category: Shibata T]]
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[[Category: Shirouzu, M]]
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[[Category: Shirouzu M]]
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[[Category: Someya, T]]
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[[Category: Someya T]]
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[[Category: Suzuki, S]]
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[[Category: Suzuki S]]
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[[Category: Terada, T]]
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[[Category: Terada T]]
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[[Category: Yokoyama, S]]
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[[Category: Yokoyama S]]
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[[Category: Ob fold]]
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[[Category: Rna binding protein]]
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[[Category: Rsgi]]
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[[Category: Smpb]]
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[[Category: Ssra associated protein]]
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Current revision

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus

PDB ID 1j1h

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