1u25

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:37, 23 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate in the C2221 crystal form==
==Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate in the C2221 crystal form==
-
<StructureSection load='1u25' size='340' side='right' caption='[[1u25]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='1u25' size='340' side='right'caption='[[1u25]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1u25]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"ancyromonas_ruminantium"_certes_1889 "ancyromonas ruminantium" certes 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U25 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1u25]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Selenomonas_ruminantium Selenomonas ruminantium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U25 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IHS:D-MYO-INOSITOL-HEXASULPHATE'>IHS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IHS:D-MYO-INOSITOL-HEXASULPHATE'>IHS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1u24|1u24]], [[1u26|1u26]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u25 OCA], [https://pdbe.org/1u25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u25 RCSB], [https://www.ebi.ac.uk/pdbsum/1u25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u25 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-phytase 5-phytase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.72 3.1.3.72] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u25 OCA], [http://pdbe.org/1u25 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1u25 RCSB], [http://www.ebi.ac.uk/pdbsum/1u25 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7WUJ1_SELRU Q7WUJ1_SELRU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u2/1u25_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u2/1u25_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 28: Line 29:
</div>
</div>
<div class="pdbe-citations 1u25" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1u25" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Phytase 3D structures|Phytase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ancyromonas ruminantium certes 1889]]
+
[[Category: Large Structures]]
-
[[Category: 5-phytase]]
+
[[Category: Selenomonas ruminantium]]
-
[[Category: Cheng, K J]]
+
[[Category: Cheng KJ]]
-
[[Category: Chou, C C]]
+
[[Category: Chou CC]]
-
[[Category: Chu, H M]]
+
[[Category: Chu HM]]
-
[[Category: Guo, R T]]
+
[[Category: Guo RT]]
-
[[Category: Lai, H L]]
+
[[Category: Lai HL]]
-
[[Category: Lin, T W]]
+
[[Category: Lin TW]]
-
[[Category: Selinger, B L]]
+
[[Category: Selinger BL]]
-
[[Category: Shr, H L]]
+
[[Category: Shr HL]]
-
[[Category: Tang, T Y]]
+
[[Category: Tang TY]]
-
[[Category: Wang, A H.J]]
+
[[Category: Wang AH-J]]
-
[[Category: Hydrolase]]
+
-
[[Category: P-loop]]
+
-
[[Category: Phytase]]
+
-
[[Category: Ptp]]
+

Current revision

Crystal structure of Selenomonas ruminantium phytase complexed with persulfated phytate in the C2221 crystal form

PDB ID 1u25

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1u25"
Personal tools