1ma1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:18, 25 October 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum==
==Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum==
-
<StructureSection load='1ma1' size='340' side='right' caption='[[1ma1]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='1ma1' size='340' side='right'caption='[[1ma1]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ma1]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"methanobacterium_thermoautotrophicus"_(sic)_zeikus_and_wolfe_1972 "methanobacterium thermoautotrophicus" (sic) zeikus and wolfe 1972]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1MA1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ma1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MA1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SODF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=145262 "Methanobacterium thermoautotrophicus" (sic) Zeikus and Wolfe 1972])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ma1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ma1 OCA], [https://pdbe.org/1ma1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ma1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ma1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ma1 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ma1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ma1 OCA], [http://pdbe.org/1ma1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ma1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ma1 PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SODF_METTH SODF_METTH]] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
+
[https://www.uniprot.org/uniprot/SODF_METTH SODF_METTH] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ma/1ma1_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ma/1ma1_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 22: Line 22:
==See Also==
==See Also==
-
*[[Superoxide Dismutase|Superoxide Dismutase]]
+
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Superoxide dismutase]]
+
[[Category: Large Structures]]
-
[[Category: Adams, J J]]
+
[[Category: Methanothermobacter thermautotrophicus]]
-
[[Category: Anderson, B F]]
+
[[Category: Adams JJ]]
-
[[Category: Jameson, G B]]
+
[[Category: Anderson BF]]
-
[[Category: Morgenstern-Badarau, I]]
+
[[Category: Jameson GB]]
-
[[Category: Renault, J P]]
+
[[Category: Morgenstern-Badarau I]]
-
[[Category: Verchere-Beaur, C]]
+
[[Category: Renault JP]]
-
[[Category: Azide inhibition]]
+
[[Category: Verchere-Beaur C]]
-
[[Category: Iron superoxide dismutase]]
+
-
[[Category: Metal specificity]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxide inactivation]]
+

Current revision

Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum

PDB ID 1ma1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools