1j33

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:14, 25 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of CobT from Thermus thermophilus HB8==
==Crystal structure of CobT from Thermus thermophilus HB8==
-
<StructureSection load='1j33' size='340' side='right' caption='[[1j33]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='1j33' size='340' side='right'caption='[[1j33]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1j33]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J33 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J33 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1j33]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J33 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J33 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j33 OCA], [http://pdbe.org/1j33 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j33 RCSB], [http://www.ebi.ac.uk/pdbsum/1j33 PDBsum], [http://www.topsan.org/Proteins/RSGI/1j33 TOPSAN]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j33 OCA], [https://pdbe.org/1j33 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j33 RCSB], [https://www.ebi.ac.uk/pdbsum/1j33 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j33 ProSAT], [https://www.topsan.org/Proteins/RSGI/1j33 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/COBT_THET8 COBT_THET8]] Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB) (By similarity).
+
[https://www.uniprot.org/uniprot/COBT_THET8 COBT_THET8] Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB) (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/1j33_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/1j33_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thet8]]
+
[[Category: Large Structures]]
-
[[Category: Asada, Y]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Kunishima, N]]
+
[[Category: Asada Y]]
-
[[Category: Miyano, M]]
+
[[Category: Kunishima N]]
-
[[Category: Structural genomic]]
+
[[Category: Miyano M]]
-
[[Category: Cobalamin biosynthesis]]
+
-
[[Category: Phosphoribosyltransferase]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Transferase]]
+
-
[[Category: Vitamin b12]]
+

Current revision

Crystal structure of CobT from Thermus thermophilus HB8

PDB ID 1j33

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools