1n3b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:03, 30 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Dephosphocoenzyme A kinase from Escherichia coli==
==Crystal Structure of Dephosphocoenzyme A kinase from Escherichia coli==
-
<StructureSection load='1n3b' size='340' side='right' caption='[[1n3b]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='1n3b' size='340' side='right'caption='[[1n3b]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1n3b]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N3B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1N3B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1n3b]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N3B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">COAE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n3b OCA], [https://pdbe.org/1n3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n3b RCSB], [https://www.ebi.ac.uk/pdbsum/1n3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n3b ProSAT], [https://www.topsan.org/Proteins/BSGI/1n3b TOPSAN]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dephospho-CoA_kinase Dephospho-CoA kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.24 2.7.1.24] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1n3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n3b OCA], [http://pdbe.org/1n3b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1n3b RCSB], [http://www.ebi.ac.uk/pdbsum/1n3b PDBsum], [http://www.topsan.org/Proteins/BSGI/1n3b TOPSAN]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/COAE_ECOLI COAE_ECOLI]] Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
+
[https://www.uniprot.org/uniprot/COAE_ECOLI COAE_ECOLI] Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n3/1n3b_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n3/1n3b_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Dephospho-CoA kinase]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Barbosa JARG]]
-
[[Category: Barbosa, J A.R G]]
+
[[Category: Cygler M]]
-
[[Category: Cygler, M]]
+
[[Category: Hung L-W]]
-
[[Category: Hung, L-W]]
+
[[Category: Li Y]]
-
[[Category: Li, Y]]
+
[[Category: Matte A]]
-
[[Category: Matte, A]]
+
[[Category: O'Toole N]]
-
[[Category: Toole, N O]]
+
-
[[Category: Alpha/beta]]
+
-
[[Category: Bsgi]]
+
-
[[Category: P-loop]]
+
-
[[Category: Transferase]]
+
-
[[Category: Trimer]]
+

Current revision

Crystal Structure of Dephosphocoenzyme A kinase from Escherichia coli

PDB ID 1n3b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1n3b"
Personal tools