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1t25
From Proteopedia
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==Plasmodium falciparum lactate dehydrogenase complexed with NADH and 3-hydroxyisoxazole-4-carboxylic acid== | ==Plasmodium falciparum lactate dehydrogenase complexed with NADH and 3-hydroxyisoxazole-4-carboxylic acid== | ||
| - | <StructureSection load='1t25' size='340' side='right' caption='[[1t25]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='1t25' size='340' side='right'caption='[[1t25]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1t25]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1t25]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. The June 2008 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Lactate Dehydrogenase'' by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2008_6 10.2210/rcsb_pdb/mom_2008_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T25 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAG:3-HYDROXYISOXAZOLE-4-CARBOXYLIC+ACID'>GAG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t25 OCA], [https://pdbe.org/1t25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t25 RCSB], [https://www.ebi.ac.uk/pdbsum/1t25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t25 ProSAT]</span></td></tr> |
| - | < | + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/LDH_PLAFD LDH_PLAFD] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t2/1t25_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t2/1t25_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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==See Also== | ==See Also== | ||
| - | *[[Lactate | + | *[[Lactate dehydrogenase 3D structures|Lactate dehydrogenase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: L-lactate dehydrogenase]] | ||
[[Category: Lactate Dehydrogenase]] | [[Category: Lactate Dehydrogenase]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| + | [[Category: Plasmodium falciparum]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
| - | [[Category: Barros | + | [[Category: Barros D]] |
| - | [[Category: Brady | + | [[Category: Brady RL]] |
| - | [[Category: Cameron | + | [[Category: Cameron A]] |
| - | [[Category: Croft | + | [[Category: Croft SL]] |
| - | [[Category: Easton | + | [[Category: De Las Heras FG]] |
| - | [[Category: Gabarro | + | [[Category: Easton A]] |
| - | [[Category: Gamo | + | [[Category: Gabarro R]] |
| - | [[Category: Garcia-Ochoa | + | [[Category: Gamo FJ]] |
| - | + | [[Category: Garcia-Ochoa S]] | |
| - | [[Category: Kendrick | + | [[Category: Kendrick H]] |
| - | [[Category: Lavandera | + | [[Category: Lavandera JL]] |
| - | [[Category: Leon | + | [[Category: Leon L]] |
| - | [[Category: Mallo | + | [[Category: Mallo A]] |
| - | [[Category: Martin | + | [[Category: Martin JJ]] |
| - | [[Category: Read | + | [[Category: Read J]] |
| - | [[Category: Risco | + | [[Category: Risco F]] |
| - | [[Category: Ruiz | + | [[Category: Ruiz JR]] |
| - | [[Category: Sanz | + | [[Category: Sanz L]] |
| - | [[Category: Sessions | + | [[Category: Sessions RB]] |
| - | [[Category: Tranter | + | [[Category: Tranter R]] |
| - | [[Category: Vivas | + | [[Category: Vivas L]] |
| - | [[Category: Winter | + | [[Category: Winter VJ]] |
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Current revision
Plasmodium falciparum lactate dehydrogenase complexed with NADH and 3-hydroxyisoxazole-4-carboxylic acid
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Categories: Lactate Dehydrogenase | Large Structures | Plasmodium falciparum | RCSB PDB Molecule of the Month | Barros D | Brady RL | Cameron A | Croft SL | De Las Heras FG | Easton A | Gabarro R | Gamo FJ | Garcia-Ochoa S | Kendrick H | Lavandera JL | Leon L | Mallo A | Martin JJ | Read J | Risco F | Ruiz JR | Sanz L | Sessions RB | Tranter R | Vivas L | Winter VJ

