This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2j0e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==THREE DIMENSIONAL STRUCTURE AND CATALYTIC MECHANISM OF 6-PHOSPHOGLUCONOLACTONASE FROM TRYPANOSOMA BRUCEI==
+
 
-
<StructureSection load='2j0e' size='340' side='right' caption='[[2j0e]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
==Three dimensional structure and catalytic mechanism of 6- phosphogluconolactonase from Trypanosoma brucei==
 +
<StructureSection load='2j0e' size='340' side='right'caption='[[2j0e]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2j0e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_(trypanozoon)_brucei Trypanosoma (trypanozoon) brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J0E FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2j0e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J0E FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphogluconolactonase 6-phosphogluconolactonase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.31 3.1.1.31] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j0e OCA], [http://pdbe.org/2j0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j0e RCSB], [http://www.ebi.ac.uk/pdbsum/2j0e PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j0e OCA], [https://pdbe.org/2j0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j0e RCSB], [https://www.ebi.ac.uk/pdbsum/2j0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j0e ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9GRG6_9TRYP Q9GRG6_9TRYP]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j0/2j0e_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j0/2j0e_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 6-phosphogluconolactonase]]
+
[[Category: Large Structures]]
-
[[Category: Delarue, M]]
+
-
[[Category: Duclert-Savatier, N]]
+
-
[[Category: Giganti, D]]
+
-
[[Category: Haouz, A]]
+
-
[[Category: Lopez, P]]
+
-
[[Category: Miclet, E]]
+
-
[[Category: Nilges, M]]
+
-
[[Category: Ouazzani, J]]
+
-
[[Category: Stoven, V]]
+
-
[[Category: Catalytic mechanism]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Pentose phosphate pathway]]
+
[[Category: Trypanosoma brucei]]
[[Category: Trypanosoma brucei]]
-
[[Category: Zinc binding site]]
+
[[Category: Delarue M]]
 +
[[Category: Duclert-Savatier N]]
 +
[[Category: Giganti D]]
 +
[[Category: Haouz A]]
 +
[[Category: Lopez P]]
 +
[[Category: Miclet E]]
 +
[[Category: Nilges M]]
 +
[[Category: Ouazzani J]]
 +
[[Category: Stoven V]]

Current revision

Three dimensional structure and catalytic mechanism of 6- phosphogluconolactonase from Trypanosoma brucei

PDB ID 2j0e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2j0e"
Personal tools