3clv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:36, 21 February 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c==
==Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c==
-
<StructureSection load='3clv' size='340' side='right' caption='[[3clv]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
+
<StructureSection load='3clv' size='340' side='right'caption='[[3clv]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3clv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CLV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3clv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFB0500c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5833 Plasmodium falciparum])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3clv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clv OCA], [http://pdbe.org/3clv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3clv RCSB], [http://www.ebi.ac.uk/pdbsum/3clv PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clv OCA], [https://pdbe.org/3clv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clv RCSB], [https://www.ebi.ac.uk/pdbsum/3clv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clv ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O96193_PLAF7 O96193_PLAF7]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clv_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clv_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Bochkarev, A]]
+
[[Category: Bochkarev A]]
-
[[Category: Bountra, C]]
+
[[Category: Bountra C]]
-
[[Category: Chattopadhyay, D]]
+
[[Category: Chattopadhyay D]]
-
[[Category: Cossar, D]]
+
[[Category: Cossar D]]
-
[[Category: Edwards, A M]]
+
[[Category: Edwards AM]]
-
[[Category: Hui, R]]
+
[[Category: Hui R]]
-
[[Category: Kozieradzki, I]]
+
[[Category: Kozieradzki I]]
-
[[Category: Langsley, G]]
+
[[Category: Langsley G]]
-
[[Category: Lew, J]]
+
[[Category: Lew J]]
-
[[Category: Structural genomic]]
+
[[Category: Schapira M]]
-
[[Category: Schapira, M]]
+
[[Category: Sukumar D]]
-
[[Category: Sukumar, D]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J]]
+
[[Category: Wernimont AK]]
-
[[Category: Wernimont, A K]]
+
-
[[Category: Gtp-binding]]
+
-
[[Category: Gtpase]]
+
-
[[Category: Malaria]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Rab]]
+
-
[[Category: Sgc]]
+
-
[[Category: Signaling protein]]
+

Current revision

Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c

PDB ID 3clv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools