2oz8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:07, 21 February 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of putative mandelate racemase from Mesorhizobium loti==
==Crystal structure of putative mandelate racemase from Mesorhizobium loti==
-
<StructureSection load='2oz8' size='340' side='right' caption='[[2oz8]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
+
<StructureSection load='2oz8' size='340' side='right'caption='[[2oz8]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2oz8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti Mesorhizobium loti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OZ8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2oz8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OZ8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mll7089 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266835 Mesorhizobium loti])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oz8 OCA], [http://pdbe.org/2oz8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2oz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2oz8 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2oz8 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oz8 OCA], [https://pdbe.org/2oz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2oz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oz8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oz8 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q987E0_RHILO Q987E0_RHILO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oz/2oz8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oz/2oz8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Mesorhizobium loti]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Mesorhizobium japonicum MAFF 303099]]
-
[[Category: Bain, K T]]
+
[[Category: Almo SC]]
-
[[Category: Bonanno, J B]]
+
[[Category: Bain KT]]
-
[[Category: Burley, S K]]
+
[[Category: Bonanno JB]]
-
[[Category: Freeman, J]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Freeman J]]
-
[[Category: Sauder, J M]]
+
[[Category: Sauder JM]]
-
[[Category: Smith, D]]
+
[[Category: Smith D]]
-
[[Category: Sridhar, V]]
+
[[Category: Sridhar V]]
-
[[Category: Wasserman, S]]
+
[[Category: Wasserman S]]
-
[[Category: Wu, B]]
+
[[Category: Wu B]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of putative mandelate racemase from Mesorhizobium loti

PDB ID 2oz8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools