2e5q
From Proteopedia
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==Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]== | ==Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]== | ||
- | <StructureSection load='2e5q' size='340' side='right' caption='[[2e5q | + | <StructureSection load='2e5q' size='340' side='right'caption='[[2e5q]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2e5q]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2e5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E5Q FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e5q OCA], [https://pdbe.org/2e5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e5q RCSB], [https://www.ebi.ac.uk/pdbsum/2e5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e5q ProSAT], [https://www.topsan.org/Proteins/RSGI/2e5q TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/PHF19_HUMAN PHF19_HUMAN] Polycomb group (PcG) that specifically binds histone H3 trimethylated at 'Lys-36' (H3K36me3) and recruits the PRC2 complex. Probably involved in the transition from an active state to a repressed state in embryonic stem cells: acts by binding to H3K36me3, a mark for transcriptional activation, and recruiting H3K36me3 histone demethylases NO66 or KDM2B, leading to demethylation of H3K36 and recruitment of the PRC2 complex that mediates H3K27me3 methylation, followed by de novo silencing. Recruits the PRC2 complex to CpG islands and contributes to embryonic stem cell self-renewal. Also binds dimethylated at 'Lys-36' (H3K36me2). Isoform 1 and isoform 2 inhibit transcription from an HSV-tk promoter.<ref>PMID:15563832</ref> <ref>PMID:21143197</ref> <ref>PMID:23104054</ref> <ref>PMID:23160351</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5q_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5q_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: Dang | + | [[Category: Large Structures]] |
- | [[Category: Inoue | + | [[Category: Dang W]] |
- | [[Category: Kigawa | + | [[Category: Inoue M]] |
- | [[Category: Muto | + | [[Category: Kigawa T]] |
- | + | [[Category: Muto Y]] | |
- | [[Category: Shirouzu | + | [[Category: Shirouzu M]] |
- | [[Category: Terada | + | [[Category: Terada T]] |
- | [[Category: Yokoyama | + | [[Category: Yokoyama S]] |
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Current revision
Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]
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Categories: Homo sapiens | Large Structures | Dang W | Inoue M | Kigawa T | Muto Y | Shirouzu M | Terada T | Yokoyama S