This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2dlt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:43, 29 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of the Ig-like domain(433- 525) of murine myosin-binding protein C, fast-type==
==Solution structure of the Ig-like domain(433- 525) of murine myosin-binding protein C, fast-type==
-
<StructureSection load='2dlt' size='340' side='right' caption='[[2dlt]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2dlt' size='340' side='right'caption='[[2dlt]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2dlt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DLT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DLT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2dlt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DLT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DLT FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mybpc2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dlt OCA], [http://pdbe.org/2dlt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dlt RCSB], [http://www.ebi.ac.uk/pdbsum/2dlt PDBsum], [http://www.topsan.org/Proteins/RSGI/2dlt TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dlt OCA], [https://pdbe.org/2dlt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dlt RCSB], [https://www.ebi.ac.uk/pdbsum/2dlt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dlt ProSAT], [https://www.topsan.org/Proteins/RSGI/2dlt TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MYPC2_MOUSE MYPC2_MOUSE]] Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. In vitro it binds MHC, F-actin and native thin filaments, and modifies the activity of actin-activated myosin ATPase. It may modulate muscle contraction or may play a more structural role (By similarity).
+
[https://www.uniprot.org/uniprot/MYPC2_MOUSE MYPC2_MOUSE] Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. In vitro it binds MHC, F-actin and native thin filaments, and modifies the activity of actin-activated myosin ATPase. It may modulate muscle contraction or may play a more structural role (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/2dlt_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/2dlt_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Hayashi, F]]
+
[[Category: Mus musculus]]
-
[[Category: Inoue, K]]
+
[[Category: Hayashi F]]
-
[[Category: Izumi, K]]
+
[[Category: Inoue K]]
-
[[Category: Structural genomic]]
+
[[Category: Izumi K]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Yoshida, M]]
+
[[Category: Yoshida M]]
-
[[Category: Contractile protein]]
+
-
[[Category: Fast-type]]
+
-
[[Category: Ig-like domain]]
+
-
[[Category: Mybpc2]]
+
-
[[Category: Myosin binding protein c]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Rsgi]]
+

Current revision

Solution structure of the Ig-like domain(433- 525) of murine myosin-binding protein C, fast-type

PDB ID 2dlt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools