This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1pg6
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==X-Ray Crystal Structure of Protein SPYM3_0169 from Streptococcus pyogenes. Northeast Structural Genomics Consortium Target DR2.== | ==X-Ray Crystal Structure of Protein SPYM3_0169 from Streptococcus pyogenes. Northeast Structural Genomics Consortium Target DR2.== | ||
| - | <StructureSection load='1pg6' size='340' side='right' caption='[[1pg6]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='1pg6' size='340' side='right'caption='[[1pg6]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1pg6]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1pg6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_MGAS8232 Streptococcus pyogenes MGAS8232]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PG6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PG6 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pg6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pg6 OCA], [https://pdbe.org/1pg6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pg6 RCSB], [https://www.ebi.ac.uk/pdbsum/1pg6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pg6 ProSAT], [https://www.topsan.org/Proteins/NESGC/1pg6 TOPSAN]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 12: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/1pg6_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/1pg6_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 20: | Line 20: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Acton | + | [[Category: Streptococcus pyogenes MGAS8232]] |
| - | [[Category: Edstrom | + | [[Category: Acton T]] |
| - | [[Category: Hunt | + | [[Category: Edstrom W]] |
| - | [[Category: Kuzin | + | [[Category: Hunt J]] |
| - | [[Category: Lee | + | [[Category: Kuzin A]] |
| - | [[Category: Montelione | + | [[Category: Lee I]] |
| - | + | [[Category: Montelione G]] | |
| - | [[Category: Rost | + | [[Category: Rost B]] |
| - | [[Category: Tong | + | [[Category: Tong L]] |
| - | [[Category: Xiao | + | [[Category: Xiao R]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
X-Ray Crystal Structure of Protein SPYM3_0169 from Streptococcus pyogenes. Northeast Structural Genomics Consortium Target DR2.
| |||||||||||
Categories: Large Structures | Streptococcus pyogenes MGAS8232 | Acton T | Edstrom W | Hunt J | Kuzin A | Lee I | Montelione G | Rost B | Tong L | Xiao R

