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2frd
From Proteopedia
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==Structure of Transhydrogenase (dI.S138A.NADH)2(dIII.NADPH)1 asymmetric complex== | ==Structure of Transhydrogenase (dI.S138A.NADH)2(dIII.NADPH)1 asymmetric complex== | ||
| - | <StructureSection load='2frd' size='340' side='right' caption='[[2frd]], [[Resolution|resolution]] 3.20Å' scene=''> | + | <StructureSection load='2frd' size='340' side='right'caption='[[2frd]], [[Resolution|resolution]] 3.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2frd]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2frd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FRD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FRD FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2frd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2frd OCA], [https://pdbe.org/2frd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2frd RCSB], [https://www.ebi.ac.uk/pdbsum/2frd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2frd ProSAT]</span></td></tr> |
| - | + | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PNTAA_RHORT PNTAA_RHORT] The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.[UniProtKB:P07001] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/2frd_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/2frd_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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==See Also== | ==See Also== | ||
| - | *[[NAD(P) transhydrogenase|NAD(P) transhydrogenase]] | + | *[[NAD(P) transhydrogenase 3D structures|NAD(P) transhydrogenase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Rhodospirillum rubrum]] |
| - | [[Category: Brondijk | + | [[Category: Brondijk TH]] |
| - | [[Category: Jackson | + | [[Category: Jackson JB]] |
| - | [[Category: Mather | + | [[Category: Mather OC]] |
| - | [[Category: Quirk | + | [[Category: Quirk PG]] |
| - | [[Category: White | + | [[Category: White SA]] |
| - | [[Category: | + | [[Category: Van Boxel GI]] |
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Current revision
Structure of Transhydrogenase (dI.S138A.NADH)2(dIII.NADPH)1 asymmetric complex
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