This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c20

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:20, 30 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Threonine-sensitive Aspartokinase from Methanococcus jannaschii with L-aspartate==
==Crystal Structure of Threonine-sensitive Aspartokinase from Methanococcus jannaschii with L-aspartate==
-
<StructureSection load='3c20' size='340' side='right' caption='[[3c20]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='3c20' size='340' side='right'caption='[[3c20]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3c20]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C20 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3C20 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3c20]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C20 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3c1m|3c1m]], [[3c1n|3c1n]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MJ0571 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c20 OCA], [https://pdbe.org/3c20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c20 RCSB], [https://www.ebi.ac.uk/pdbsum/3c20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c20 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aspartate_kinase Aspartate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.4 2.7.2.4] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c20 OCA], [http://pdbe.org/3c20 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c20 RCSB], [http://www.ebi.ac.uk/pdbsum/3c20 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AK_METJA AK_METJA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c20_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c20_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspartate kinase]]
+
[[Category: Large Structures]]
-
[[Category: Atcc 43067]]
+
[[Category: Methanocaldococcus jannaschii]]
-
[[Category: Liu, X]]
+
[[Category: Liu X]]
-
[[Category: Pavlovsky, A G]]
+
[[Category: Pavlovsky AG]]
-
[[Category: Viola, R E]]
+
[[Category: Viola RE]]
-
[[Category: Act domain]]
+
-
[[Category: Allosetric inhibition]]
+
-
[[Category: Amino-acid biosynthesis]]
+
-
[[Category: Kinase]]
+
-
[[Category: Theronine-sensitive]]
+
-
[[Category: Threonine biosynthesis]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of Threonine-sensitive Aspartokinase from Methanococcus jannaschii with L-aspartate

PDB ID 3c20

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3c20"
Personal tools