This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1w2v
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | == | + | |
| - | <StructureSection load='1w2v' size='340' side='right' caption='[[1w2v]], [[Resolution|resolution]] 1.55Å' scene=''> | + | ==The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus== |
| + | <StructureSection load='1w2v' size='340' side='right'caption='[[1w2v]], [[Resolution|resolution]] 1.55Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1w2v]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1w2v]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W2V FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w2v OCA], [https://pdbe.org/1w2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w2v RCSB], [https://www.ebi.ac.uk/pdbsum/1w2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w2v ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/XYNA_CELJU XYNA_CELJU] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w2/1w2v_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w2/1w2v_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 31: | Line 33: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Cellvibrio | + | [[Category: Cellvibrio japonicus]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Andrews | + | [[Category: Andrews S]] |
| - | [[Category: Davies | + | [[Category: Davies GJ]] |
| - | [[Category: Ducros | + | [[Category: Ducros VMA]] |
| - | [[Category: Glbert | + | [[Category: Glbert HJ]] |
| - | [[Category: Lakey | + | [[Category: Lakey JH]] |
| - | [[Category: Pell | + | [[Category: Pell GN]] |
| - | [[Category: Taylor | + | [[Category: Taylor EJ]] |
| - | [[Category: Vincent | + | [[Category: Vincent F]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus
| |||||||||||
Categories: Cellvibrio japonicus | Large Structures | Andrews S | Davies GJ | Ducros VMA | Glbert HJ | Lakey JH | Pell GN | Taylor EJ | Vincent F

