5fv0

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m (Protected "5fv0" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5fv0 is ON HOLD
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==The cytoplasmic domain of EssC==
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<StructureSection load='5fv0' size='340' side='right'caption='[[5fv0]], [[Resolution|resolution]] 2.91&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5fv0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans Geobacillus thermodenitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FV0 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.91&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=ONA:3-O-[2-(METHYLAMINO)BENZOYL]ADENOSINE+5-(TETRAHYDROGEN+TRIPHOSPHATE)'>ONA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fv0 OCA], [https://pdbe.org/5fv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fv0 RCSB], [https://www.ebi.ac.uk/pdbsum/5fv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fv0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ECCC_GEOTN ECCC_GEOTN] Part of the ESX specialized secretion system, which exports proteins from the cell including EsxA (ESAT-6) and EsxB (CFP-10) (By similarity). Might be the translocase subunit (PubMed:25865481). Probably only the first FtsK domain can hydrolyze ATP (PubMed:27130157).[UniProtKB:P9WNB1][UniProtKB:P9WNB3]<ref>PMID:25865481</ref> <ref>PMID:27130157</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The membrane-bound protein EssC is an integral component of the bacterial Type VII secretion system (T7SS), which is a determinant of virulence in important Gram-positive pathogens. The protein is predicted to consist of an intracellular repeat of forkhead-associated (FHA) domains at the N-terminus, two transmembrane helices and three P-loop-containing ATPase-type domains, D1-D3, forming the C-terminal intracellular segment. We present crystal structures of the N-terminal FHA domains (EssC-N) and a C-terminal fragment EssC-C from Geobacillus thermodenitrificans, encompassing two of the ATPase-type modules, D2 and D3. Module D2 binds ATP with high affinity whereas D3 does not. The EssC-N and EssC-C constructs are monomeric in solution, but the full-length recombinant protein, with a molecular mass of approximately 169 kDa, forms a multimer of approximately 1 MDa. The observation of protomer contacts in the crystal structure of EssC-C together with similarity to the DNA translocase FtsK, suggests a model for a hexameric EssC assembly. Such an observation potentially identifies the key, and to date elusive, component of pore formation required for secretion by this recently discovered secretion system. The juxtaposition of the FHA domains suggests potential for interacting with other components of the secretion system. The structural data were used to guide an analysis of which domains are required for the T7SS machine to function in pathogenic Staphylococcus aureus The extreme C-terminal ATPase domain appears to be essential for EssC activity as a key part of the T7SS, whereas D2 and FHA domains are required for the production of a stable and functional protein.
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Authors: Zoltner, M., Ng, W.M.A.V., Palmer, T., Hunter, W.N.
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EssC: domain structures inform on the elusive translocation channel in the Type VII secretion system.,Zoltner M, Ng WM, Money JJ, Fyfe PK, Kneuper H, Palmer T, Hunter WN Biochem J. 2016 Jul 1;473(13):1941-52. doi: 10.1042/BCJ20160257. Epub 2016 Apr, 29. PMID:27130157<ref>PMID:27130157</ref>
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Description: The cytoplasmic domain of EssC
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Ng, W.M.A.V]]
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<div class="pdbe-citations 5fv0" style="background-color:#fffaf0;"></div>
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[[Category: Hunter, W.N]]
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== References ==
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[[Category: Palmer, T]]
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<references/>
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[[Category: Zoltner, M]]
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__TOC__
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</StructureSection>
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[[Category: Geobacillus thermodenitrificans]]
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[[Category: Large Structures]]
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[[Category: Hunter WN]]
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[[Category: Ng WMAV]]
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[[Category: Palmer T]]
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[[Category: Zoltner M]]

Current revision

The cytoplasmic domain of EssC

PDB ID 5fv0

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