5hzb
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5hzb is ON HOLD Authors: Hansman, G.S., Koromyslova, A.D., Singh, B.K.S. Description: Crystal structure of GII.10 P domain in complex with 2-fucosy...) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of GII.10 P domain in complex with 2-fucosyllactose (2'FL)== | |
| + | <StructureSection load='5hzb' size='340' side='right'caption='[[5hzb]], [[Resolution|resolution]] 1.55Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5hzb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_GII.10 Norovirus GII.10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HZB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HZB FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.553Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hzb OCA], [https://pdbe.org/5hzb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hzb RCSB], [https://www.ebi.ac.uk/pdbsum/5hzb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hzb ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5F4T5_9CALI Q5F4T5_9CALI] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Histo-blood group antigens (HBGAs) are important binding factors for norovirus infections. We show that two human milk oligosaccharides, 2' -fucosyllactose (2' FL) and 3-fucosyllactose (3FL), could block norovirus from binding to surrogate HBGA samples. We found that 2' FL and 3FL bound at the equivalent HBGA pocket on the norovirus capsid using X-ray crystallography. Our data revealed that 2' FL and 3FL structurally mimic HBGAs. These results suggest that 2' FL and 3FL might act as natural-occurring decoys in humans. | ||
| - | + | Structural Basis for Norovirus Inhibition by Human Milk Oligosaccharides.,Weichert S, Koromyslova A, Singh BK, Hansman S, Jennewein S, Schroten H, Hansman GS J Virol. 2016 Feb 17. pii: JVI.03223-15. PMID:26889023<ref>PMID:26889023</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 5hzb" style="background-color:#fffaf0;"></div> |
| - | [[Category: Koromyslova | + | |
| - | [[Category: | + | ==See Also== |
| + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Norovirus GII 10]] | ||
| + | [[Category: Hansman GS]] | ||
| + | [[Category: Koromyslova AD]] | ||
| + | [[Category: Singh BKS]] | ||
Current revision
Crystal structure of GII.10 P domain in complex with 2-fucosyllactose (2'FL)
| |||||||||||
