5i4b

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'''Unreleased structure'''
 
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The entry 5i4b is ON HOLD
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==Erwinia chrysanthemi L-asparaginase E63Q +S254N mutation + L-Aspartic acid==
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<StructureSection load='5i4b' size='340' side='right'caption='[[5i4b]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5i4b]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dickeya_chrysanthemi Dickeya chrysanthemi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I4B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I4B FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i4b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i4b OCA], [https://pdbe.org/5i4b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i4b RCSB], [https://www.ebi.ac.uk/pdbsum/5i4b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i4b ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ASPG_DICCH ASPG_DICCH]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Current FDA-approved l-asparaginases also possess significant l-glutaminase activity, which correlates with many of the toxic side effects of these drugs. Therefore, l-asparaginases with reduced l-glutaminase activity are predicted to be safer. We exploited our recently described structures of the Erwinia chrysanthemi l-asparaginase (ErA) to inform the design of mutants with diminished ability to hydrolyze l-glutamine. Structural analysis of these variants provides insight into the molecular basis for the increased l-asparagine specificity. A primary role is attributed to the E63Q mutation that acts to hinder the correct positioning of l-glutamine but not l-asparagine. The substitution of Ser-254 with either an asparagine or a glutamine increases the l-asparagine specificity but only when combined with the E63Q mutation. The A31I mutation reduces the substrate Km value; this is a key property to allow the required therapeutic l-asparagine depletion. Significantly, an ultra-low l-glutaminase ErA variant maintained its cell killing ability. By diminishing the l-glutaminase activity of these highly active l-asparaginases, our engineered ErA variants hold promise as l-asparaginases with fewer side effects.
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Authors: Nguyen, H.A., Lavie, A.
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Design and Characterization of Erwinia Chrysanthemi l-Asparaginase Variants with Diminished l-Glutaminase Activity.,Nguyen HA, Su Y, Lavie A J Biol Chem. 2016 Aug 19;291(34):17664-76. doi: 10.1074/jbc.M116.728485. Epub , 2016 Jun 27. PMID:27354283<ref>PMID:27354283</ref>
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Description: Erwinia chrysanthemi L-asparaginase E63Q +S254N mutation + L-Aspartic acid
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Nguyen, H.A]]
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<div class="pdbe-citations 5i4b" style="background-color:#fffaf0;"></div>
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[[Category: Lavie, A]]
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==See Also==
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*[[Asparaginase 3D structures|Asparaginase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Dickeya chrysanthemi]]
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[[Category: Large Structures]]
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[[Category: Lavie A]]
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[[Category: Nguyen HA]]

Current revision

Erwinia chrysanthemi L-asparaginase E63Q +S254N mutation + L-Aspartic acid

PDB ID 5i4b

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