5b2h
From Proteopedia
(Difference between revisions)
(4 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi== | |
+ | <StructureSection load='5b2h' size='340' side='right'caption='[[5b2h]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5b2h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum Clostridium botulinum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B2H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B2H FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b2h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b2h OCA], [https://pdbe.org/5b2h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b2h RCSB], [https://www.ebi.ac.uk/pdbsum/5b2h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b2h ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q93HT5_CLOBO Q93HT5_CLOBO] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Clostridium botulinum produces a large toxin complex (L-TC) comprising botulinum neurotoxin associated with auxiliary nontoxic proteins. A complex of 33- and 17-kDa hemagglutinins (an HA-33/HA-17 trimer) enhances L-TC transport across the intestinal epithelial cell layer via binding HA-33 to a sugar on the cell surface. At least two subtypes of serotype C/D HA-33 exhibit differing preferences for the sugars sialic acid and galactose. Here, we compared the three-dimensional structures of the galactose-binding HA-33 and HA-33/HA-17 trimers produced by the C-Yoichi strain. Comparisons of serotype C/D HA-33 sequences reveal a variable region with relatively low sequence similarity across the C. botulinum strains; the variability of this region may influence the manner of sugar-recognition by HA-33. Crystal structures of sialic acid- and galactose-binding HA-33 are broadly similar in appearance. However, small-angle X-ray scattering revealed distinct solution structures for HA-33/HA-17 trimers. A structural change in the C-terminal variable region of HA-33 might cause a dramatic shift in the conformation and sugar-recognition mode of HA-33/HA-17 trimer. | ||
- | + | Conformational divergence in the HA-33/HA-17 trimer of serotype C and D botulinum toxin complex.,Sagane Y, Hayashi S, Akiyama T, Matsumoto T, Hasegawa K, Yamano A, Suzuki T, Niwa K, Watanabe T, Yajima S Biochem Biophys Res Commun. 2016 May 27. pii: S0006-291X(16)30821-X. doi:, 10.1016/j.bbrc.2016.05.113. PMID:27237978<ref>PMID:27237978</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5b2h" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
- | [[Category: | + | [[Category: Clostridium botulinum]] |
- | [[Category: Sagane | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Akiyama T]] |
- | [[Category: | + | [[Category: Hasegawa K]] |
- | [[Category: | + | [[Category: Hayashi S]] |
+ | [[Category: Matsumoto T]] | ||
+ | [[Category: Niwa K]] | ||
+ | [[Category: Sagane Y]] | ||
+ | [[Category: Suzuki T]] | ||
+ | [[Category: Watanabe T]] | ||
+ | [[Category: Yajima S]] | ||
+ | [[Category: Yamano A]] |
Current revision
Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi
|
Categories: Clostridium botulinum | Large Structures | Akiyama T | Hasegawa K | Hayashi S | Matsumoto T | Niwa K | Sagane Y | Suzuki T | Watanabe T | Yajima S | Yamano A