5b2h

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'''Unreleased structure'''
 
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The entry 5b2h is ON HOLD until Paper Publication
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==Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi==
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<StructureSection load='5b2h' size='340' side='right'caption='[[5b2h]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5b2h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum Clostridium botulinum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B2H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B2H FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b2h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b2h OCA], [https://pdbe.org/5b2h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b2h RCSB], [https://www.ebi.ac.uk/pdbsum/5b2h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b2h ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q93HT5_CLOBO Q93HT5_CLOBO]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Clostridium botulinum produces a large toxin complex (L-TC) comprising botulinum neurotoxin associated with auxiliary nontoxic proteins. A complex of 33- and 17-kDa hemagglutinins (an HA-33/HA-17 trimer) enhances L-TC transport across the intestinal epithelial cell layer via binding HA-33 to a sugar on the cell surface. At least two subtypes of serotype C/D HA-33 exhibit differing preferences for the sugars sialic acid and galactose. Here, we compared the three-dimensional structures of the galactose-binding HA-33 and HA-33/HA-17 trimers produced by the C-Yoichi strain. Comparisons of serotype C/D HA-33 sequences reveal a variable region with relatively low sequence similarity across the C. botulinum strains; the variability of this region may influence the manner of sugar-recognition by HA-33. Crystal structures of sialic acid- and galactose-binding HA-33 are broadly similar in appearance. However, small-angle X-ray scattering revealed distinct solution structures for HA-33/HA-17 trimers. A structural change in the C-terminal variable region of HA-33 might cause a dramatic shift in the conformation and sugar-recognition mode of HA-33/HA-17 trimer.
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Authors: Akiyama, T., Hayashi, S., Matsumoto, T., Hasegawa, K., Yamano, A., Suzuki, T., Niwa, K., Watanabe, T., Sagane, Y., Yajima, S.
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Conformational divergence in the HA-33/HA-17 trimer of serotype C and D botulinum toxin complex.,Sagane Y, Hayashi S, Akiyama T, Matsumoto T, Hasegawa K, Yamano A, Suzuki T, Niwa K, Watanabe T, Yajima S Biochem Biophys Res Commun. 2016 May 27. pii: S0006-291X(16)30821-X. doi:, 10.1016/j.bbrc.2016.05.113. PMID:27237978<ref>PMID:27237978</ref>
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Description: Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Niwa, K]]
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<div class="pdbe-citations 5b2h" style="background-color:#fffaf0;"></div>
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[[Category: Matsumoto, T]]
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== References ==
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[[Category: Yajima, S]]
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<references/>
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[[Category: Yamano, A]]
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__TOC__
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[[Category: Hayashi, S]]
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</StructureSection>
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[[Category: Hasegawa, K]]
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[[Category: Clostridium botulinum]]
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[[Category: Sagane, Y]]
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[[Category: Large Structures]]
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[[Category: Akiyama, T]]
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[[Category: Akiyama T]]
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[[Category: Suzuki, T]]
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[[Category: Hasegawa K]]
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[[Category: Watanabe, T]]
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[[Category: Hayashi S]]
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[[Category: Matsumoto T]]
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[[Category: Niwa K]]
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[[Category: Sagane Y]]
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[[Category: Suzuki T]]
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[[Category: Watanabe T]]
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[[Category: Yajima S]]
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[[Category: Yamano A]]

Current revision

Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi

PDB ID 5b2h

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