5i76
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5i76 is ON HOLD Authors: Dae-Won, Sim, Ji-Hun, Kim, Seung-Hyeon, Seok, Min-Duk, Seo, Young Pil, Kim, Hyung-Sik, Won Description: Crystal structure ...) |
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of FM318, a recombinant Fab adopted from cetuximab== | |
+ | <StructureSection load='5i76' size='340' side='right'caption='[[5i76]], [[Resolution|resolution]] 1.92Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5i76]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens/Mus_musculus_xenograft Homo sapiens/Mus musculus xenograft]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I76 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I76 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.922Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i76 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i76 OCA], [https://pdbe.org/5i76 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i76 RCSB], [https://www.ebi.ac.uk/pdbsum/5i76 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i76 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Fragment engineering of monoclonal antibodies (mAbs) has emerged as an excellent paradigm to develop highly efficient therapeutic and/or diagnostic agents. Engineered mAb fragments can be economically produced in bacterial systems using recombinant DNA technologies. In this work, we established recombinant production in Escherichia coli for monovalent antigen-binding fragment (Fab) adopted from a clinically used anticancer mAB drug cetuximab targeting epidermal growth factor receptor (EGFR). Recombinant DNA constructs were designed to express both polypeptide chains comprising Fab in a single vector and to secrete them to bacterial periplasmic space for efficient folding. Particularly, a C-terminal engineering to confer an interchain disulfide bond appeared to be able to enhance its heterodimeric integrity and EGFR-binding activity. Conformational relevance of the purified final product was validated by mass spectrometry and crystal structure at 1.9 A resolution. Finally, our recombinant cetuximab-Fab was found to have strong binding affinity to EGFR overexpressed in human squamous carcinoma model (A431) cells. Its binding ability was comparable to that of cetuximab. Its EGFR-binding affinity was estimated at approximately 0.7 nM of Kd in vitro, which was quite stronger than the binding affinity of natural ligand EGF. Hence, the results validate that our construction could serve as an efficient platform to produce a recombinant cetuximab-Fab with a retained antigen-binding functionality. | ||
- | + | Bacterial production and structure-functional validation of a recombinant antigen-binding fragment (Fab) of an anti-cancer therapeutic antibody targeting epidermal growth factor receptor.,Kim JH, Sim DW, Park D, Jung TG, Lee S, Oh T, Ha JR, Seok SH, Seo MD, Kang HC, Kim YP, Won HS Appl Microbiol Biotechnol. 2016 Dec;100(24):10521-10529. Epub 2016 Jul 28. PMID:27470143<ref>PMID:27470143</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5i76" style="background-color:#fffaf0;"></div> |
+ | |||
+ | ==See Also== | ||
+ | *[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Homo sapiens/Mus musculus xenograft]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Kim JH]] | ||
+ | [[Category: Kim YP]] | ||
+ | [[Category: Seo MD]] | ||
+ | [[Category: Seok SH]] | ||
+ | [[Category: Sim DW]] | ||
+ | [[Category: Won HS]] |
Current revision
Crystal structure of FM318, a recombinant Fab adopted from cetuximab
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