This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5i1f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 23 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of UTP-glucose-1-phosphate uridylyltransferase from Burkholderia vietnamiensis in complex with Uridine-5'-diphosphate-glucose==
==Crystal structure of UTP-glucose-1-phosphate uridylyltransferase from Burkholderia vietnamiensis in complex with Uridine-5'-diphosphate-glucose==
-
<StructureSection load='5i1f' size='340' side='right' caption='[[5i1f]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='5i1f' size='340' side='right'caption='[[5i1f]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5i1f]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I1F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5I1F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5i1f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_vietnamiensis_G4 Burkholderia vietnamiensis G4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I1F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/UTP--glucose-1-phosphate_uridylyltransferase UTP--glucose-1-phosphate uridylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.9 2.7.7.9] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5i1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i1f OCA], [http://pdbe.org/5i1f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i1f RCSB], [http://www.ebi.ac.uk/pdbsum/5i1f PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i1f OCA], [https://pdbe.org/5i1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i1f RCSB], [https://www.ebi.ac.uk/pdbsum/5i1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i1f ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A4JT02_BURVG A4JT02_BURVG]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: UTP--glucose-1-phosphate uridylyltransferase]]
+
[[Category: Burkholderia vietnamiensis G4]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Burkholderia vietnamiensis]]
+
-
[[Category: Pyrophosphorylase]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Transferase]]
+
-
[[Category: Udp-glucose]]
+
-
[[Category: Udp-glucose pyrophosphorylase]]
+
-
[[Category: Uridylyltransferase]]
+
-
[[Category: Utp-glucose-1-phosphate uridylyltransferase]]
+

Current revision

Crystal structure of UTP-glucose-1-phosphate uridylyltransferase from Burkholderia vietnamiensis in complex with Uridine-5'-diphosphate-glucose

PDB ID 5i1f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools